Gene : Cagra.2236s0016 C. grandiflora v1.1
Genomic Order:  16 Name:  ? Cagra.2236s0016
Secondary Identifier:  ? PAC:28906587
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2236s0016 0.5kb upstream 0.5kb upstream 2583 true Scaffold2236: 58700-61282 Capsella grandiflora
Cagra.2236s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold2236: 60783-61282 Capsella grandiflora
Cagra.2236s0016 0.5kb downstream 0.5kb downstream 2583 true Scaffold2236: 58200-60782 Capsella grandiflora
Cagra.2236s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold2236: 58200-58699 Capsella grandiflora
Cagra.2236s0016 1.0kb upstream 1.0kb upstream 3083 true Scaffold2236: 58700-61782 Capsella grandiflora
Cagra.2236s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold2236: 60783-61782 Capsella grandiflora
Cagra.2236s0016 1.0kb downstream 1.0kb downstream 3083 true Scaffold2236: 57700-60782 Capsella grandiflora
Cagra.2236s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold2236: 57700-58699 Capsella grandiflora
Cagra.2236s0016 2.0kb upstream 2.0kb upstream 4083 true Scaffold2236: 58700-62782 Capsella grandiflora
Cagra.2236s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold2236: 60783-62782 Capsella grandiflora
Cagra.2236s0016 2.0kb downstream 2.0kb downstream 4083 true Scaffold2236: 56700-60782 Capsella grandiflora
Cagra.2236s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold2236: 56700-58699 Capsella grandiflora
Cagra.2236s0016 5.0kb upstream 5.0kb upstream 7083 true Scaffold2236: 58700-65782 Capsella grandiflora
Cagra.2236s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold2236: 60783-65782 Capsella grandiflora
Cagra.2236s0016 5.0kb downstream 5.0kb downstream 7083 true Scaffold2236: 53700-60782 Capsella grandiflora
Cagra.2236s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold2236: 53700-58699 Capsella grandiflora
Cagra.2236s0016 10.0kb upstream 10.0kb upstream 12083 true Scaffold2236: 58700-70782 Capsella grandiflora
Cagra.2236s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold2236: 60783-70782 Capsella grandiflora
Cagra.2236s0016 10.0kb downstream 10.0kb downstream 12083 true Scaffold2236: 48700-60782 Capsella grandiflora
Cagra.2236s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold2236: 48700-58699 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375385 5261 Brassicaceae View MSA
123841227 5264 Brassicales-Malvales View MSA
124338338 5266 SBM View MSA
124251024 5268 Malvidae View MSA
124072901 5270 Rosid View MSA
123748116 5271 Pentapetalae View MSA
122796381 5272 Eudicot View MSA
122050791 5273 Angiosperm View MSA
121349509 5274 Embryophyte View MSA
123381337 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain