Gene : Cagra.2238s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10621:SF9 - F12F1.16 PROTEIN-RELATED Genomic Order:  8
Name:  ? Cagra.2238s0008 Secondary Identifier:  ? PAC:28918219
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2238s0008 0.5kb upstream 0.5kb upstream 3337 true Scaffold2238: 20299-23635 Capsella grandiflora
Cagra.2238s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold2238: 23136-23635 Capsella grandiflora
Cagra.2238s0008 0.5kb downstream 0.5kb downstream 3337 true Scaffold2238: 19799-23135 Capsella grandiflora
Cagra.2238s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold2238: 19799-20298 Capsella grandiflora
Cagra.2238s0008 1.0kb upstream 1.0kb upstream 3837 true Scaffold2238: 20299-24135 Capsella grandiflora
Cagra.2238s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold2238: 23136-24135 Capsella grandiflora
Cagra.2238s0008 1.0kb downstream 1.0kb downstream 3837 true Scaffold2238: 19299-23135 Capsella grandiflora
Cagra.2238s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold2238: 19299-20298 Capsella grandiflora
Cagra.2238s0008 2.0kb upstream 2.0kb upstream 4837 true Scaffold2238: 20299-25135 Capsella grandiflora
Cagra.2238s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold2238: 23136-25135 Capsella grandiflora
Cagra.2238s0008 2.0kb downstream 2.0kb downstream 4837 true Scaffold2238: 18299-23135 Capsella grandiflora
Cagra.2238s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold2238: 18299-20298 Capsella grandiflora
Cagra.2238s0008 5.0kb upstream 5.0kb upstream 7837 true Scaffold2238: 20299-28135 Capsella grandiflora
Cagra.2238s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold2238: 23136-28135 Capsella grandiflora
Cagra.2238s0008 5.0kb downstream 5.0kb downstream 7837 true Scaffold2238: 15299-23135 Capsella grandiflora
Cagra.2238s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold2238: 15299-20298 Capsella grandiflora
Cagra.2238s0008 10.0kb upstream 10.0kb upstream 12837 true Scaffold2238: 20299-33135 Capsella grandiflora
Cagra.2238s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold2238: 23136-33135 Capsella grandiflora
Cagra.2238s0008 10.0kb downstream 10.0kb downstream 12837 true Scaffold2238: 10299-23135 Capsella grandiflora
Cagra.2238s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold2238: 10299-20298 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363949 5261 Brassicaceae View MSA
123839172 5264 Brassicales-Malvales View MSA
124341735 5266 SBM View MSA
124250812 5268 Malvidae View MSA
124061824 5270 Rosid View MSA
123740240 5271 Pentapetalae View MSA
122785996 5272 Eudicot View MSA
122046102 5273 Angiosperm View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain