Gene : Cagra.2197s0016 C. grandiflora v1.1
Defline:  (1 of 2) KOG2014 - SMT3/SUMO-activating complex, AOS1/RAD31 component Genomic Order:  16
Name:  ? Cagra.2197s0016 Secondary Identifier:  ? PAC:28899662
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2197s0016 0.5kb upstream 0.5kb upstream 2843 true Scaffold2197: 46812-49654 Capsella grandiflora
Cagra.2197s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold2197: 49155-49654 Capsella grandiflora
Cagra.2197s0016 0.5kb downstream 0.5kb downstream 2843 true Scaffold2197: 46312-49154 Capsella grandiflora
Cagra.2197s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold2197: 46312-46811 Capsella grandiflora
Cagra.2197s0016 1.0kb upstream 1.0kb upstream 3343 true Scaffold2197: 46812-50154 Capsella grandiflora
Cagra.2197s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold2197: 49155-50154 Capsella grandiflora
Cagra.2197s0016 1.0kb downstream 1.0kb downstream 3343 true Scaffold2197: 45812-49154 Capsella grandiflora
Cagra.2197s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold2197: 45812-46811 Capsella grandiflora
Cagra.2197s0016 2.0kb upstream 2.0kb upstream 4343 true Scaffold2197: 46812-51154 Capsella grandiflora
Cagra.2197s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold2197: 49155-51154 Capsella grandiflora
Cagra.2197s0016 2.0kb downstream 2.0kb downstream 4343 true Scaffold2197: 44812-49154 Capsella grandiflora
Cagra.2197s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold2197: 44812-46811 Capsella grandiflora
Cagra.2197s0016 5.0kb upstream 5.0kb upstream 7343 true Scaffold2197: 46812-54154 Capsella grandiflora
Cagra.2197s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold2197: 49155-54154 Capsella grandiflora
Cagra.2197s0016 5.0kb downstream 5.0kb downstream 7343 true Scaffold2197: 41812-49154 Capsella grandiflora
Cagra.2197s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold2197: 41812-46811 Capsella grandiflora
Cagra.2197s0016 10.0kb upstream 10.0kb upstream 12343 true Scaffold2197: 46812-59154 Capsella grandiflora
Cagra.2197s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold2197: 49155-59154 Capsella grandiflora
Cagra.2197s0016 10.0kb downstream 10.0kb downstream 12343 true Scaffold2197: 36812-49154 Capsella grandiflora
Cagra.2197s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold2197: 36812-46811 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041218 5273 Angiosperm View MSA
122375340 5261 Brassicaceae View MSA
123838519 5264 Brassicales-Malvales View MSA
124338287 5266 SBM View MSA
124242935 5268 Malvidae View MSA
124063789 5270 Rosid View MSA
123737552 5271 Pentapetalae View MSA
122790997 5272 Eudicot View MSA
121348552 5274 Embryophyte View MSA
123424130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain