Gene : Cagra.2197s0026 C. grandiflora v1.1
Defline:  (1 of 1) PTHR14145:SF1 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 6 Genomic Order:  26
Name:  ? Cagra.2197s0026 Secondary Identifier:  ? PAC:28899681
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2197s0026 0.5kb upstream 0.5kb upstream 2839 true Scaffold2197: 81036-83874 Capsella grandiflora
Cagra.2197s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold2197: 81036-81535 Capsella grandiflora
Cagra.2197s0026 0.5kb downstream 0.5kb downstream 2839 true Scaffold2197: 81536-84374 Capsella grandiflora
Cagra.2197s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold2197: 83875-84374 Capsella grandiflora
Cagra.2197s0026 1.0kb upstream 1.0kb upstream 3339 true Scaffold2197: 80536-83874 Capsella grandiflora
Cagra.2197s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold2197: 80536-81535 Capsella grandiflora
Cagra.2197s0026 1.0kb downstream 1.0kb downstream 3339 true Scaffold2197: 81536-84874 Capsella grandiflora
Cagra.2197s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold2197: 83875-84874 Capsella grandiflora
Cagra.2197s0026 2.0kb upstream 2.0kb upstream 4339 true Scaffold2197: 79536-83874 Capsella grandiflora
Cagra.2197s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold2197: 79536-81535 Capsella grandiflora
Cagra.2197s0026 2.0kb downstream 2.0kb downstream 4339 true Scaffold2197: 81536-85874 Capsella grandiflora
Cagra.2197s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold2197: 83875-85874 Capsella grandiflora
Cagra.2197s0026 5.0kb upstream 5.0kb upstream 7339 true Scaffold2197: 76536-83874 Capsella grandiflora
Cagra.2197s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold2197: 76536-81535 Capsella grandiflora
Cagra.2197s0026 5.0kb downstream 5.0kb downstream 7339 true Scaffold2197: 81536-88874 Capsella grandiflora
Cagra.2197s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold2197: 83875-88874 Capsella grandiflora
Cagra.2197s0026 10.0kb upstream 10.0kb upstream 12339 true Scaffold2197: 71536-83874 Capsella grandiflora
Cagra.2197s0026 10.0kb upstream 10.0kb upstream 10000 false Scaffold2197: 71536-81535 Capsella grandiflora
Cagra.2197s0026 10.0kb downstream 10.0kb downstream 12339 true Scaffold2197: 81536-93874 Capsella grandiflora
Cagra.2197s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold2197: 83875-93874 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375017 5261 Brassicaceae View MSA
123835829 5264 Brassicales-Malvales View MSA
124342441 5266 SBM View MSA
124239112 5268 Malvidae View MSA
124061166 5270 Rosid View MSA
123736562 5271 Pentapetalae View MSA
122788737 5272 Eudicot View MSA
122047339 5273 Angiosperm View MSA
121344552 5274 Embryophyte View MSA
123425003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain