Gene : Cagra.2233s0001 C. grandiflora v1.1
Defline:  (1 of 12) 2.4.1.34 - 1,3-beta-glucan synthase / UDP-glucose-1,3-beta-D-glucan glucosyltransferase Genomic Order:  1
Name:  ? Cagra.2233s0001 Secondary Identifier:  ? PAC:28907633
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6773 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2233s0001 0.5kb upstream 0.5kb upstream 11425 true Scaffold2233: 478-11902 Capsella grandiflora
Cagra.2233s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2233: 478-977 Capsella grandiflora
Cagra.2233s0001 0.5kb downstream 0.5kb downstream 11425 true Scaffold2233: 978-12402 Capsella grandiflora
Cagra.2233s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2233: 11903-12402 Capsella grandiflora
Cagra.2233s0001 1.0kb upstream 1.0kb upstream 11902 true Scaffold2233: 1-11902 Capsella grandiflora
Cagra.2233s0001 1.0kb upstream 1.0kb upstream 977 false Scaffold2233: 1-977 Capsella grandiflora
Cagra.2233s0001 1.0kb downstream 1.0kb downstream 11925 true Scaffold2233: 978-12902 Capsella grandiflora
Cagra.2233s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2233: 11903-12902 Capsella grandiflora
Cagra.2233s0001 2.0kb upstream 2.0kb upstream 11902 true Scaffold2233: 1-11902 Capsella grandiflora
Cagra.2233s0001 2.0kb upstream 2.0kb upstream 977 false Scaffold2233: 1-977 Capsella grandiflora
Cagra.2233s0001 2.0kb downstream 2.0kb downstream 12925 true Scaffold2233: 978-13902 Capsella grandiflora
Cagra.2233s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2233: 11903-13902 Capsella grandiflora
Cagra.2233s0001 5.0kb upstream 5.0kb upstream 11902 true Scaffold2233: 1-11902 Capsella grandiflora
Cagra.2233s0001 5.0kb upstream 5.0kb upstream 977 false Scaffold2233: 1-977 Capsella grandiflora
Cagra.2233s0001 5.0kb downstream 5.0kb downstream 15925 true Scaffold2233: 978-16902 Capsella grandiflora
Cagra.2233s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold2233: 11903-16902 Capsella grandiflora
Cagra.2233s0001 10.0kb upstream 10.0kb upstream 11902 true Scaffold2233: 1-11902 Capsella grandiflora
Cagra.2233s0001 10.0kb upstream 10.0kb upstream 977 false Scaffold2233: 1-977 Capsella grandiflora
Cagra.2233s0001 10.0kb downstream 10.0kb downstream 20925 true Scaffold2233: 978-21902 Capsella grandiflora
Cagra.2233s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold2233: 11903-21902 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361913 5261 Brassicaceae View MSA
123828093 5264 Brassicales-Malvales View MSA
124346230 5266 SBM View MSA
124240742 5268 Malvidae View MSA
124065172 5270 Rosid View MSA
123736428 5271 Pentapetalae View MSA
122796898 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain