Gene : Cagra.2179s0040 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24322:SF566 - GLUCOSE AND RIBITOL DEHYDROGENASE HOMOLOG 1-RELATED Genomic Order:  40
Name:  ? Cagra.2179s0040 Secondary Identifier:  ? PAC:28918714
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2179s0040 0.5kb upstream 0.5kb upstream 1878 true Scaffold2179: 149227-151104 Capsella grandiflora
Cagra.2179s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold2179: 150605-151104 Capsella grandiflora
Cagra.2179s0040 0.5kb downstream 0.5kb downstream 1878 true Scaffold2179: 148727-150604 Capsella grandiflora
Cagra.2179s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold2179: 148727-149226 Capsella grandiflora
Cagra.2179s0040 1.0kb upstream 1.0kb upstream 2378 true Scaffold2179: 149227-151604 Capsella grandiflora
Cagra.2179s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold2179: 150605-151604 Capsella grandiflora
Cagra.2179s0040 1.0kb downstream 1.0kb downstream 2378 true Scaffold2179: 148227-150604 Capsella grandiflora
Cagra.2179s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold2179: 148227-149226 Capsella grandiflora
Cagra.2179s0040 2.0kb upstream 2.0kb upstream 3378 true Scaffold2179: 149227-152604 Capsella grandiflora
Cagra.2179s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold2179: 150605-152604 Capsella grandiflora
Cagra.2179s0040 2.0kb downstream 2.0kb downstream 3378 true Scaffold2179: 147227-150604 Capsella grandiflora
Cagra.2179s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold2179: 147227-149226 Capsella grandiflora
Cagra.2179s0040 5.0kb upstream 5.0kb upstream 6378 true Scaffold2179: 149227-155604 Capsella grandiflora
Cagra.2179s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold2179: 150605-155604 Capsella grandiflora
Cagra.2179s0040 5.0kb downstream 5.0kb downstream 6378 true Scaffold2179: 144227-150604 Capsella grandiflora
Cagra.2179s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold2179: 144227-149226 Capsella grandiflora
Cagra.2179s0040 10.0kb upstream 10.0kb upstream 11378 true Scaffold2179: 149227-160604 Capsella grandiflora
Cagra.2179s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold2179: 150605-160604 Capsella grandiflora
Cagra.2179s0040 10.0kb downstream 10.0kb downstream 11378 true Scaffold2179: 139227-150604 Capsella grandiflora
Cagra.2179s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold2179: 139227-149226 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370701 5261 Brassicaceae View MSA
123800023 5264 Brassicales-Malvales View MSA
124297484 5266 SBM View MSA
124243819 5268 Malvidae View MSA
124062635 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain