Gene : Cagra.2179s0042 C. grandiflora v1.1
Defline:  (1 of 2) KOG3114 - Uncharacterized conserved protein Genomic Order:  42
Name:  ? Cagra.2179s0042 Secondary Identifier:  ? PAC:28918692
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2179s0042 0.5kb upstream 0.5kb upstream 2539 true Scaffold2179: 154674-157212 Capsella grandiflora
Cagra.2179s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold2179: 156713-157212 Capsella grandiflora
Cagra.2179s0042 0.5kb downstream 0.5kb downstream 2539 true Scaffold2179: 154174-156712 Capsella grandiflora
Cagra.2179s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold2179: 154174-154673 Capsella grandiflora
Cagra.2179s0042 1.0kb upstream 1.0kb upstream 3039 true Scaffold2179: 154674-157712 Capsella grandiflora
Cagra.2179s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold2179: 156713-157712 Capsella grandiflora
Cagra.2179s0042 1.0kb downstream 1.0kb downstream 3039 true Scaffold2179: 153674-156712 Capsella grandiflora
Cagra.2179s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold2179: 153674-154673 Capsella grandiflora
Cagra.2179s0042 2.0kb upstream 2.0kb upstream 4039 true Scaffold2179: 154674-158712 Capsella grandiflora
Cagra.2179s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold2179: 156713-158712 Capsella grandiflora
Cagra.2179s0042 2.0kb downstream 2.0kb downstream 4039 true Scaffold2179: 152674-156712 Capsella grandiflora
Cagra.2179s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold2179: 152674-154673 Capsella grandiflora
Cagra.2179s0042 5.0kb upstream 5.0kb upstream 7039 true Scaffold2179: 154674-161712 Capsella grandiflora
Cagra.2179s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold2179: 156713-161712 Capsella grandiflora
Cagra.2179s0042 5.0kb downstream 5.0kb downstream 7039 true Scaffold2179: 149674-156712 Capsella grandiflora
Cagra.2179s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold2179: 149674-154673 Capsella grandiflora
Cagra.2179s0042 10.0kb upstream 10.0kb upstream 12039 true Scaffold2179: 154674-166712 Capsella grandiflora
Cagra.2179s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold2179: 156713-166712 Capsella grandiflora
Cagra.2179s0042 10.0kb downstream 10.0kb downstream 12039 true Scaffold2179: 144674-156712 Capsella grandiflora
Cagra.2179s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold2179: 144674-154673 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360340 5261 Brassicaceae View MSA
123840619 5264 Brassicales-Malvales View MSA
124341227 5266 SBM View MSA
124240730 5268 Malvidae View MSA
124062675 5270 Rosid View MSA
123739303 5271 Pentapetalae View MSA
122790193 5272 Eudicot View MSA
122045240 5273 Angiosperm View MSA
121344088 5274 Embryophyte View MSA
123427303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain