Gene : Cagra.2181s0012 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED Genomic Order:  12
Name:  ? Cagra.2181s0012 Secondary Identifier:  ? PAC:28907282
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2181s0012 0.5kb upstream 0.5kb upstream 4301 true Scaffold2181: 47072-51372 Capsella grandiflora
Cagra.2181s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold2181: 50873-51372 Capsella grandiflora
Cagra.2181s0012 0.5kb downstream 0.5kb downstream 4301 true Scaffold2181: 46572-50872 Capsella grandiflora
Cagra.2181s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold2181: 46572-47071 Capsella grandiflora
Cagra.2181s0012 1.0kb upstream 1.0kb upstream 4801 true Scaffold2181: 47072-51872 Capsella grandiflora
Cagra.2181s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold2181: 50873-51872 Capsella grandiflora
Cagra.2181s0012 1.0kb downstream 1.0kb downstream 4801 true Scaffold2181: 46072-50872 Capsella grandiflora
Cagra.2181s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold2181: 46072-47071 Capsella grandiflora
Cagra.2181s0012 2.0kb upstream 2.0kb upstream 5801 true Scaffold2181: 47072-52872 Capsella grandiflora
Cagra.2181s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold2181: 50873-52872 Capsella grandiflora
Cagra.2181s0012 2.0kb downstream 2.0kb downstream 5801 true Scaffold2181: 45072-50872 Capsella grandiflora
Cagra.2181s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold2181: 45072-47071 Capsella grandiflora
Cagra.2181s0012 5.0kb upstream 5.0kb upstream 8801 true Scaffold2181: 47072-55872 Capsella grandiflora
Cagra.2181s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold2181: 50873-55872 Capsella grandiflora
Cagra.2181s0012 5.0kb downstream 5.0kb downstream 8801 true Scaffold2181: 42072-50872 Capsella grandiflora
Cagra.2181s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold2181: 42072-47071 Capsella grandiflora
Cagra.2181s0012 10.0kb upstream 10.0kb upstream 13480 true Scaffold2181: 47072-60551 Capsella grandiflora
Cagra.2181s0012 10.0kb upstream 10.0kb upstream 9679 false Scaffold2181: 50873-60551 Capsella grandiflora
Cagra.2181s0012 10.0kb downstream 10.0kb downstream 13801 true Scaffold2181: 37072-50872 Capsella grandiflora
Cagra.2181s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold2181: 37072-47071 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377963 5261 Brassicaceae View MSA
123831510 5264 Brassicales-Malvales View MSA
124341613 5266 SBM View MSA
124242690 5268 Malvidae View MSA
124062740 5270 Rosid View MSA
123737829 5271 Pentapetalae View MSA
122791575 5272 Eudicot View MSA
122049319 5273 Angiosperm View MSA
121311340 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain