Gene : Cagra.2192s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13803:SF4 - SEC24 Genomic Order:  4
Name:  ? Cagra.2192s0004 Secondary Identifier:  ? PAC:28907227
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2192s0004 0.5kb upstream 0.5kb upstream 8980 true Scaffold2192: 17496-26475 Capsella grandiflora
Cagra.2192s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold2192: 25976-26475 Capsella grandiflora
Cagra.2192s0004 0.5kb downstream 0.5kb downstream 8980 true Scaffold2192: 16996-25975 Capsella grandiflora
Cagra.2192s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold2192: 16996-17495 Capsella grandiflora
Cagra.2192s0004 1.0kb upstream 1.0kb upstream 9480 true Scaffold2192: 17496-26975 Capsella grandiflora
Cagra.2192s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold2192: 25976-26975 Capsella grandiflora
Cagra.2192s0004 1.0kb downstream 1.0kb downstream 9480 true Scaffold2192: 16496-25975 Capsella grandiflora
Cagra.2192s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold2192: 16496-17495 Capsella grandiflora
Cagra.2192s0004 2.0kb upstream 2.0kb upstream 10480 true Scaffold2192: 17496-27975 Capsella grandiflora
Cagra.2192s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold2192: 25976-27975 Capsella grandiflora
Cagra.2192s0004 2.0kb downstream 2.0kb downstream 10480 true Scaffold2192: 15496-25975 Capsella grandiflora
Cagra.2192s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold2192: 15496-17495 Capsella grandiflora
Cagra.2192s0004 5.0kb upstream 5.0kb upstream 13480 true Scaffold2192: 17496-30975 Capsella grandiflora
Cagra.2192s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold2192: 25976-30975 Capsella grandiflora
Cagra.2192s0004 5.0kb downstream 5.0kb downstream 13480 true Scaffold2192: 12496-25975 Capsella grandiflora
Cagra.2192s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold2192: 12496-17495 Capsella grandiflora
Cagra.2192s0004 10.0kb upstream 10.0kb upstream 18480 true Scaffold2192: 17496-35975 Capsella grandiflora
Cagra.2192s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold2192: 25976-35975 Capsella grandiflora
Cagra.2192s0004 10.0kb downstream 10.0kb downstream 18480 true Scaffold2192: 7496-25975 Capsella grandiflora
Cagra.2192s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold2192: 7496-17495 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374515 5261 Brassicaceae View MSA
123800770 5264 Brassicales-Malvales View MSA
124298142 5266 SBM View MSA
124247961 5268 Malvidae View MSA
124069114 5270 Rosid View MSA
123737025 5271 Pentapetalae View MSA
122786743 5272 Eudicot View MSA
122044519 5273 Angiosperm View MSA
121345636 5274 Embryophyte View MSA
123424318 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain