Gene : Cagra.2175s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10476//PTHR10476:SF11 - CHARGED MULTIVESICULAR BODY PROTEIN Genomic Order:  7
Name:  ? Cagra.2175s0007 Secondary Identifier:  ? PAC:28895792
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2175s0007 0.5kb upstream 0.5kb upstream 1822 true Scaffold2175: 25733-27554 Capsella grandiflora
Cagra.2175s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold2175: 25733-26232 Capsella grandiflora
Cagra.2175s0007 0.5kb downstream 0.5kb downstream 1822 true Scaffold2175: 26233-28054 Capsella grandiflora
Cagra.2175s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold2175: 27555-28054 Capsella grandiflora
Cagra.2175s0007 1.0kb upstream 1.0kb upstream 2322 true Scaffold2175: 25233-27554 Capsella grandiflora
Cagra.2175s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold2175: 25233-26232 Capsella grandiflora
Cagra.2175s0007 1.0kb downstream 1.0kb downstream 2322 true Scaffold2175: 26233-28554 Capsella grandiflora
Cagra.2175s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold2175: 27555-28554 Capsella grandiflora
Cagra.2175s0007 2.0kb upstream 2.0kb upstream 3322 true Scaffold2175: 24233-27554 Capsella grandiflora
Cagra.2175s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold2175: 24233-26232 Capsella grandiflora
Cagra.2175s0007 2.0kb downstream 2.0kb downstream 3322 true Scaffold2175: 26233-29554 Capsella grandiflora
Cagra.2175s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold2175: 27555-29554 Capsella grandiflora
Cagra.2175s0007 5.0kb upstream 5.0kb upstream 6322 true Scaffold2175: 21233-27554 Capsella grandiflora
Cagra.2175s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold2175: 21233-26232 Capsella grandiflora
Cagra.2175s0007 5.0kb downstream 5.0kb downstream 6322 true Scaffold2175: 26233-32554 Capsella grandiflora
Cagra.2175s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold2175: 27555-32554 Capsella grandiflora
Cagra.2175s0007 10.0kb upstream 10.0kb upstream 11322 true Scaffold2175: 16233-27554 Capsella grandiflora
Cagra.2175s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold2175: 16233-26232 Capsella grandiflora
Cagra.2175s0007 10.0kb downstream 10.0kb downstream 11322 true Scaffold2175: 26233-37554 Capsella grandiflora
Cagra.2175s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold2175: 27555-37554 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378234 5261 Brassicaceae View MSA
123831095 5264 Brassicales-Malvales View MSA
124341950 5266 SBM View MSA
124253428 5268 Malvidae View MSA
124063895 5270 Rosid View MSA
123748216 5271 Pentapetalae View MSA
122794716 5272 Eudicot View MSA
122044262 5273 Angiosperm View MSA
121349635 5274 Embryophyte View MSA
123427092 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain