Gene : Cagra.2175s0020 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31412:SF2 - ZINC METALLOPEPTIDASE EGY3, CHLOROPLASTIC-RELATED Genomic Order:  20
Name:  ? Cagra.2175s0020 Secondary Identifier:  ? PAC:28895812
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2175s0020 0.5kb upstream 0.5kb upstream 2718 true Scaffold2175: 76232-78949 Capsella grandiflora
Cagra.2175s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold2175: 78450-78949 Capsella grandiflora
Cagra.2175s0020 0.5kb downstream 0.5kb downstream 2718 true Scaffold2175: 75732-78449 Capsella grandiflora
Cagra.2175s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold2175: 75732-76231 Capsella grandiflora
Cagra.2175s0020 1.0kb upstream 1.0kb upstream 3218 true Scaffold2175: 76232-79449 Capsella grandiflora
Cagra.2175s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold2175: 78450-79449 Capsella grandiflora
Cagra.2175s0020 1.0kb downstream 1.0kb downstream 3218 true Scaffold2175: 75232-78449 Capsella grandiflora
Cagra.2175s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold2175: 75232-76231 Capsella grandiflora
Cagra.2175s0020 2.0kb upstream 2.0kb upstream 4218 true Scaffold2175: 76232-80449 Capsella grandiflora
Cagra.2175s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold2175: 78450-80449 Capsella grandiflora
Cagra.2175s0020 2.0kb downstream 2.0kb downstream 4218 true Scaffold2175: 74232-78449 Capsella grandiflora
Cagra.2175s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold2175: 74232-76231 Capsella grandiflora
Cagra.2175s0020 5.0kb upstream 5.0kb upstream 7218 true Scaffold2175: 76232-83449 Capsella grandiflora
Cagra.2175s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold2175: 78450-83449 Capsella grandiflora
Cagra.2175s0020 5.0kb downstream 5.0kb downstream 7218 true Scaffold2175: 71232-78449 Capsella grandiflora
Cagra.2175s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold2175: 71232-76231 Capsella grandiflora
Cagra.2175s0020 10.0kb upstream 10.0kb upstream 12218 true Scaffold2175: 76232-88449 Capsella grandiflora
Cagra.2175s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold2175: 78450-88449 Capsella grandiflora
Cagra.2175s0020 10.0kb downstream 10.0kb downstream 12218 true Scaffold2175: 66232-78449 Capsella grandiflora
Cagra.2175s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold2175: 66232-76231 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371897 5261 Brassicaceae View MSA
123828823 5264 Brassicales-Malvales View MSA
124342564 5266 SBM View MSA
124253420 5268 Malvidae View MSA
124067271 5270 Rosid View MSA
123738003 5271 Pentapetalae View MSA
122792522 5272 Eudicot View MSA
122042498 5273 Angiosperm View MSA
121347143 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain