Gene : Cagra.2175s0042 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10516:SF308 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC-RELATED Genomic Order:  42
Name:  ? Cagra.2175s0042 Secondary Identifier:  ? PAC:28895813
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2175s0042 0.5kb upstream 0.5kb upstream 1979 true Scaffold2175: 164982-166960 Capsella grandiflora
Cagra.2175s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold2175: 164982-165481 Capsella grandiflora
Cagra.2175s0042 0.5kb downstream 0.5kb downstream 1979 true Scaffold2175: 165482-167460 Capsella grandiflora
Cagra.2175s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold2175: 166961-167460 Capsella grandiflora
Cagra.2175s0042 1.0kb upstream 1.0kb upstream 2479 true Scaffold2175: 164482-166960 Capsella grandiflora
Cagra.2175s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold2175: 164482-165481 Capsella grandiflora
Cagra.2175s0042 1.0kb downstream 1.0kb downstream 2479 true Scaffold2175: 165482-167960 Capsella grandiflora
Cagra.2175s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold2175: 166961-167960 Capsella grandiflora
Cagra.2175s0042 2.0kb upstream 2.0kb upstream 3479 true Scaffold2175: 163482-166960 Capsella grandiflora
Cagra.2175s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold2175: 163482-165481 Capsella grandiflora
Cagra.2175s0042 2.0kb downstream 2.0kb downstream 3479 true Scaffold2175: 165482-168960 Capsella grandiflora
Cagra.2175s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold2175: 166961-168960 Capsella grandiflora
Cagra.2175s0042 5.0kb upstream 5.0kb upstream 6479 true Scaffold2175: 160482-166960 Capsella grandiflora
Cagra.2175s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold2175: 160482-165481 Capsella grandiflora
Cagra.2175s0042 5.0kb downstream 5.0kb downstream 6479 true Scaffold2175: 165482-171960 Capsella grandiflora
Cagra.2175s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold2175: 166961-171960 Capsella grandiflora
Cagra.2175s0042 10.0kb upstream 10.0kb upstream 11479 true Scaffold2175: 155482-166960 Capsella grandiflora
Cagra.2175s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold2175: 155482-165481 Capsella grandiflora
Cagra.2175s0042 10.0kb downstream 10.0kb downstream 9234 true Scaffold2175: 165482-174715 Capsella grandiflora
Cagra.2175s0042 10.0kb downstream 10.0kb downstream 7755 false Scaffold2175: 166961-174715 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041293 5273 Angiosperm View MSA
122369851 5261 Brassicaceae View MSA
123834523 5264 Brassicales-Malvales View MSA
124342022 5266 SBM View MSA
124237774 5268 Malvidae View MSA
124068387 5270 Rosid View MSA
123740147 5271 Pentapetalae View MSA
122793412 5272 Eudicot View MSA
121344596 5274 Embryophyte View MSA
123424769 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain