Gene : Cagra.2179s0018 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11223:SF3 - EXPORTIN-5 Genomic Order:  18
Name:  ? Cagra.2179s0018 Secondary Identifier:  ? PAC:28918691
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2179s0018 0.5kb upstream 0.5kb upstream 7851 true Scaffold2179: 56126-63976 Capsella grandiflora
Cagra.2179s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold2179: 63477-63976 Capsella grandiflora
Cagra.2179s0018 0.5kb downstream 0.5kb downstream 7851 true Scaffold2179: 55626-63476 Capsella grandiflora
Cagra.2179s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold2179: 55626-56125 Capsella grandiflora
Cagra.2179s0018 1.0kb upstream 1.0kb upstream 8351 true Scaffold2179: 56126-64476 Capsella grandiflora
Cagra.2179s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold2179: 63477-64476 Capsella grandiflora
Cagra.2179s0018 1.0kb downstream 1.0kb downstream 8351 true Scaffold2179: 55126-63476 Capsella grandiflora
Cagra.2179s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold2179: 55126-56125 Capsella grandiflora
Cagra.2179s0018 2.0kb upstream 2.0kb upstream 9351 true Scaffold2179: 56126-65476 Capsella grandiflora
Cagra.2179s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold2179: 63477-65476 Capsella grandiflora
Cagra.2179s0018 2.0kb downstream 2.0kb downstream 9351 true Scaffold2179: 54126-63476 Capsella grandiflora
Cagra.2179s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold2179: 54126-56125 Capsella grandiflora
Cagra.2179s0018 5.0kb upstream 5.0kb upstream 12351 true Scaffold2179: 56126-68476 Capsella grandiflora
Cagra.2179s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold2179: 63477-68476 Capsella grandiflora
Cagra.2179s0018 5.0kb downstream 5.0kb downstream 12351 true Scaffold2179: 51126-63476 Capsella grandiflora
Cagra.2179s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold2179: 51126-56125 Capsella grandiflora
Cagra.2179s0018 10.0kb upstream 10.0kb upstream 17351 true Scaffold2179: 56126-73476 Capsella grandiflora
Cagra.2179s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold2179: 63477-73476 Capsella grandiflora
Cagra.2179s0018 10.0kb downstream 10.0kb downstream 17351 true Scaffold2179: 46126-63476 Capsella grandiflora
Cagra.2179s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold2179: 46126-56125 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041330 5273 Angiosperm View MSA
122380245 5261 Brassicaceae View MSA
123827869 5264 Brassicales-Malvales View MSA
124346120 5266 SBM View MSA
124239254 5268 Malvidae View MSA
124066188 5270 Rosid View MSA
123739336 5271 Pentapetalae View MSA
122792869 5272 Eudicot View MSA
121345288 5274 Embryophyte View MSA
123428240 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain