Gene : Cagra.2151s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10666:SF135 - F15I1.6 PROTEIN-RELATED Genomic Order:  2
Name:  ? Cagra.2151s0002 Secondary Identifier:  ? PAC:28894803
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2151s0002 0.5kb upstream 0.5kb upstream 3730 true Scaffold2151: 6415-10144 Capsella grandiflora
Cagra.2151s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold2151: 6415-6914 Capsella grandiflora
Cagra.2151s0002 0.5kb downstream 0.5kb downstream 3730 true Scaffold2151: 6915-10644 Capsella grandiflora
Cagra.2151s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold2151: 10145-10644 Capsella grandiflora
Cagra.2151s0002 1.0kb upstream 1.0kb upstream 4230 true Scaffold2151: 5915-10144 Capsella grandiflora
Cagra.2151s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold2151: 5915-6914 Capsella grandiflora
Cagra.2151s0002 1.0kb downstream 1.0kb downstream 4230 true Scaffold2151: 6915-11144 Capsella grandiflora
Cagra.2151s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold2151: 10145-11144 Capsella grandiflora
Cagra.2151s0002 2.0kb upstream 2.0kb upstream 5230 true Scaffold2151: 4915-10144 Capsella grandiflora
Cagra.2151s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold2151: 4915-6914 Capsella grandiflora
Cagra.2151s0002 2.0kb downstream 2.0kb downstream 5230 true Scaffold2151: 6915-12144 Capsella grandiflora
Cagra.2151s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold2151: 10145-12144 Capsella grandiflora
Cagra.2151s0002 5.0kb upstream 5.0kb upstream 8230 true Scaffold2151: 1915-10144 Capsella grandiflora
Cagra.2151s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold2151: 1915-6914 Capsella grandiflora
Cagra.2151s0002 5.0kb downstream 5.0kb downstream 8230 true Scaffold2151: 6915-15144 Capsella grandiflora
Cagra.2151s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold2151: 10145-15144 Capsella grandiflora
Cagra.2151s0002 10.0kb upstream 10.0kb upstream 10144 true Scaffold2151: 1-10144 Capsella grandiflora
Cagra.2151s0002 10.0kb upstream 10.0kb upstream 6914 false Scaffold2151: 1-6914 Capsella grandiflora
Cagra.2151s0002 10.0kb downstream 10.0kb downstream 13230 true Scaffold2151: 6915-20144 Capsella grandiflora
Cagra.2151s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold2151: 10145-20144 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370293 5261 Brassicaceae View MSA
123840083 5264 Brassicales-Malvales View MSA
124348699 5266 SBM View MSA
124242483 5268 Malvidae View MSA
124070925 5270 Rosid View MSA
123742266 5271 Pentapetalae View MSA
122789753 5272 Eudicot View MSA
122042633 5273 Angiosperm View MSA
121350148 5274 Embryophyte View MSA
123381595 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain