Gene : Cagra.2171s0005 C. grandiflora v1.1
Defline:  (1 of 5) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Genomic Order:  5
Name:  ? Cagra.2171s0005 Secondary Identifier:  ? PAC:28898636
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2171s0005 0.5kb upstream 0.5kb upstream 6162 true Scaffold2171: 17402-23563 Capsella grandiflora
Cagra.2171s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2171: 17402-17901 Capsella grandiflora
Cagra.2171s0005 0.5kb downstream 0.5kb downstream 6162 true Scaffold2171: 17902-24063 Capsella grandiflora
Cagra.2171s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2171: 23564-24063 Capsella grandiflora
Cagra.2171s0005 1.0kb upstream 1.0kb upstream 6662 true Scaffold2171: 16902-23563 Capsella grandiflora
Cagra.2171s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2171: 16902-17901 Capsella grandiflora
Cagra.2171s0005 1.0kb downstream 1.0kb downstream 6662 true Scaffold2171: 17902-24563 Capsella grandiflora
Cagra.2171s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2171: 23564-24563 Capsella grandiflora
Cagra.2171s0005 2.0kb upstream 2.0kb upstream 7662 true Scaffold2171: 15902-23563 Capsella grandiflora
Cagra.2171s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2171: 15902-17901 Capsella grandiflora
Cagra.2171s0005 2.0kb downstream 2.0kb downstream 7662 true Scaffold2171: 17902-25563 Capsella grandiflora
Cagra.2171s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2171: 23564-25563 Capsella grandiflora
Cagra.2171s0005 5.0kb upstream 5.0kb upstream 10662 true Scaffold2171: 12902-23563 Capsella grandiflora
Cagra.2171s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2171: 12902-17901 Capsella grandiflora
Cagra.2171s0005 5.0kb downstream 5.0kb downstream 10662 true Scaffold2171: 17902-28563 Capsella grandiflora
Cagra.2171s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2171: 23564-28563 Capsella grandiflora
Cagra.2171s0005 10.0kb upstream 10.0kb upstream 15662 true Scaffold2171: 7902-23563 Capsella grandiflora
Cagra.2171s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold2171: 7902-17901 Capsella grandiflora
Cagra.2171s0005 10.0kb downstream 10.0kb downstream 15662 true Scaffold2171: 17902-33563 Capsella grandiflora
Cagra.2171s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold2171: 23564-33563 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379621 5261 Brassicaceae View MSA
123833812 5264 Brassicales-Malvales View MSA
124341903 5266 SBM View MSA
124237249 5268 Malvidae View MSA
124074060 5270 Rosid View MSA
123744401 5271 Pentapetalae View MSA
122795716 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain