Gene : Cagra.2455s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23500:SF55 - SUGAR TRANSPORT PROTEIN 1-RELATED Genomic Order:  1
Name:  ? Cagra.2455s0001 Secondary Identifier:  ? PAC:28916398
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2455s0001 0.5kb upstream 0.5kb upstream 1543 true Scaffold2455: 5125-6667 Capsella grandiflora
Cagra.2455s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2455: 5125-5624 Capsella grandiflora
Cagra.2455s0001 0.5kb downstream 0.5kb downstream 1543 true Scaffold2455: 5625-7167 Capsella grandiflora
Cagra.2455s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2455: 6668-7167 Capsella grandiflora
Cagra.2455s0001 1.0kb upstream 1.0kb upstream 2043 true Scaffold2455: 4625-6667 Capsella grandiflora
Cagra.2455s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2455: 4625-5624 Capsella grandiflora
Cagra.2455s0001 1.0kb downstream 1.0kb downstream 2043 true Scaffold2455: 5625-7667 Capsella grandiflora
Cagra.2455s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2455: 6668-7667 Capsella grandiflora
Cagra.2455s0001 2.0kb upstream 2.0kb upstream 3043 true Scaffold2455: 3625-6667 Capsella grandiflora
Cagra.2455s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2455: 3625-5624 Capsella grandiflora
Cagra.2455s0001 2.0kb downstream 2.0kb downstream 3043 true Scaffold2455: 5625-8667 Capsella grandiflora
Cagra.2455s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2455: 6668-8667 Capsella grandiflora
Cagra.2455s0001 5.0kb upstream 5.0kb upstream 6043 true Scaffold2455: 625-6667 Capsella grandiflora
Cagra.2455s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold2455: 625-5624 Capsella grandiflora
Cagra.2455s0001 5.0kb downstream 5.0kb downstream 6043 true Scaffold2455: 5625-11667 Capsella grandiflora
Cagra.2455s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold2455: 6668-11667 Capsella grandiflora
Cagra.2455s0001 10.0kb upstream 10.0kb upstream 6667 true Scaffold2455: 1-6667 Capsella grandiflora
Cagra.2455s0001 10.0kb upstream 10.0kb upstream 5624 false Scaffold2455: 1-5624 Capsella grandiflora
Cagra.2455s0001 10.0kb downstream 10.0kb downstream 11043 true Scaffold2455: 5625-16667 Capsella grandiflora
Cagra.2455s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold2455: 6668-16667 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333252 5261 Brassicaceae Singleton cluster - no MSA
123774219 5264 Brassicales-Malvales Singleton cluster - no MSA
124349710 5266 SBM View MSA
124254079 5268 Malvidae View MSA
124069409 5270 Rosid View MSA
123753403 5271 Pentapetalae View MSA
122797213 5272 Eudicot View MSA
122051255 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121350723 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain