Gene : Cagra.2460s0039 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31942:SF15 - MLO-LIKE PROTEIN 11-RELATED Genomic Order:  39
Name:  ? Cagra.2460s0039 Secondary Identifier:  ? PAC:28897515
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2460s0039 0.5kb upstream 0.5kb upstream 3906 true Scaffold2460: 128701-132606 Capsella grandiflora
Cagra.2460s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold2460: 128701-129200 Capsella grandiflora
Cagra.2460s0039 0.5kb downstream 0.5kb downstream 3906 true Scaffold2460: 129201-133106 Capsella grandiflora
Cagra.2460s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold2460: 132607-133106 Capsella grandiflora
Cagra.2460s0039 1.0kb upstream 1.0kb upstream 4406 true Scaffold2460: 128201-132606 Capsella grandiflora
Cagra.2460s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold2460: 128201-129200 Capsella grandiflora
Cagra.2460s0039 1.0kb downstream 1.0kb downstream 4406 true Scaffold2460: 129201-133606 Capsella grandiflora
Cagra.2460s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold2460: 132607-133606 Capsella grandiflora
Cagra.2460s0039 2.0kb upstream 2.0kb upstream 5406 true Scaffold2460: 127201-132606 Capsella grandiflora
Cagra.2460s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold2460: 127201-129200 Capsella grandiflora
Cagra.2460s0039 2.0kb downstream 2.0kb downstream 5406 true Scaffold2460: 129201-134606 Capsella grandiflora
Cagra.2460s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold2460: 132607-134606 Capsella grandiflora
Cagra.2460s0039 5.0kb upstream 5.0kb upstream 8406 true Scaffold2460: 124201-132606 Capsella grandiflora
Cagra.2460s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold2460: 124201-129200 Capsella grandiflora
Cagra.2460s0039 5.0kb downstream 5.0kb downstream 8406 true Scaffold2460: 129201-137606 Capsella grandiflora
Cagra.2460s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold2460: 132607-137606 Capsella grandiflora
Cagra.2460s0039 10.0kb upstream 10.0kb upstream 13406 true Scaffold2460: 119201-132606 Capsella grandiflora
Cagra.2460s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold2460: 119201-129200 Capsella grandiflora
Cagra.2460s0039 10.0kb downstream 10.0kb downstream 13406 true Scaffold2460: 129201-142606 Capsella grandiflora
Cagra.2460s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold2460: 132607-142606 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333255 5261 Brassicaceae Singleton cluster - no MSA
123774222 5264 Brassicales-Malvales Singleton cluster - no MSA
124272673 5266 SBM Singleton cluster - no MSA
124255500 5268 Malvidae View MSA
124070607 5270 Rosid View MSA
123749822 5271 Pentapetalae View MSA
122795258 5272 Eudicot View MSA
122048156 5273 Angiosperm View MSA
121351201 5274 Embryophyte View MSA
123428182 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain