Gene : Cagra.2418s0012 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11945:SF152 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL12 Genomic Order:  12
Name:  ? Cagra.2418s0012 Secondary Identifier:  ? PAC:28906102
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2418s0012 0.5kb upstream 0.5kb upstream 2723 true Scaffold2418: 27240-29962 Capsella grandiflora
Cagra.2418s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold2418: 29463-29962 Capsella grandiflora
Cagra.2418s0012 0.5kb downstream 0.5kb downstream 2723 true Scaffold2418: 26740-29462 Capsella grandiflora
Cagra.2418s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold2418: 26740-27239 Capsella grandiflora
Cagra.2418s0012 1.0kb upstream 1.0kb upstream 3223 true Scaffold2418: 27240-30462 Capsella grandiflora
Cagra.2418s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold2418: 29463-30462 Capsella grandiflora
Cagra.2418s0012 1.0kb downstream 1.0kb downstream 3223 true Scaffold2418: 26240-29462 Capsella grandiflora
Cagra.2418s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold2418: 26240-27239 Capsella grandiflora
Cagra.2418s0012 2.0kb upstream 2.0kb upstream 4223 true Scaffold2418: 27240-31462 Capsella grandiflora
Cagra.2418s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold2418: 29463-31462 Capsella grandiflora
Cagra.2418s0012 2.0kb downstream 2.0kb downstream 4223 true Scaffold2418: 25240-29462 Capsella grandiflora
Cagra.2418s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold2418: 25240-27239 Capsella grandiflora
Cagra.2418s0012 5.0kb upstream 5.0kb upstream 7223 true Scaffold2418: 27240-34462 Capsella grandiflora
Cagra.2418s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold2418: 29463-34462 Capsella grandiflora
Cagra.2418s0012 5.0kb downstream 5.0kb downstream 7223 true Scaffold2418: 22240-29462 Capsella grandiflora
Cagra.2418s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold2418: 22240-27239 Capsella grandiflora
Cagra.2418s0012 10.0kb upstream 10.0kb upstream 12223 true Scaffold2418: 27240-39462 Capsella grandiflora
Cagra.2418s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold2418: 29463-39462 Capsella grandiflora
Cagra.2418s0012 10.0kb downstream 10.0kb downstream 12223 true Scaffold2418: 17240-29462 Capsella grandiflora
Cagra.2418s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold2418: 17240-27239 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026526 5273 Angiosperm View MSA
122365782 5261 Brassicaceae View MSA
123827979 5264 Brassicales-Malvales View MSA
124340633 5266 SBM View MSA
124251112 5268 Malvidae View MSA
124065817 5270 Rosid View MSA
123738815 5271 Pentapetalae View MSA
122789214 5272 Eudicot View MSA
121296369 5274 Embryophyte View MSA
123334545 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain