Gene : Cagra.2418s0034 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11206:SF75 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  34
Name:  ? Cagra.2418s0034 Secondary Identifier:  ? PAC:28906109
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2418s0034 0.5kb upstream 0.5kb upstream 3279 true Scaffold2418: 106679-109957 Capsella grandiflora
Cagra.2418s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold2418: 109458-109957 Capsella grandiflora
Cagra.2418s0034 0.5kb downstream 0.5kb downstream 3279 true Scaffold2418: 106179-109457 Capsella grandiflora
Cagra.2418s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold2418: 106179-106678 Capsella grandiflora
Cagra.2418s0034 1.0kb upstream 1.0kb upstream 3779 true Scaffold2418: 106679-110457 Capsella grandiflora
Cagra.2418s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold2418: 109458-110457 Capsella grandiflora
Cagra.2418s0034 1.0kb downstream 1.0kb downstream 3779 true Scaffold2418: 105679-109457 Capsella grandiflora
Cagra.2418s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold2418: 105679-106678 Capsella grandiflora
Cagra.2418s0034 2.0kb upstream 2.0kb upstream 4779 true Scaffold2418: 106679-111457 Capsella grandiflora
Cagra.2418s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold2418: 109458-111457 Capsella grandiflora
Cagra.2418s0034 2.0kb downstream 2.0kb downstream 4779 true Scaffold2418: 104679-109457 Capsella grandiflora
Cagra.2418s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold2418: 104679-106678 Capsella grandiflora
Cagra.2418s0034 5.0kb upstream 5.0kb upstream 7779 true Scaffold2418: 106679-114457 Capsella grandiflora
Cagra.2418s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold2418: 109458-114457 Capsella grandiflora
Cagra.2418s0034 5.0kb downstream 5.0kb downstream 7779 true Scaffold2418: 101679-109457 Capsella grandiflora
Cagra.2418s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold2418: 101679-106678 Capsella grandiflora
Cagra.2418s0034 10.0kb upstream 10.0kb upstream 12779 true Scaffold2418: 106679-119457 Capsella grandiflora
Cagra.2418s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold2418: 109458-119457 Capsella grandiflora
Cagra.2418s0034 10.0kb downstream 10.0kb downstream 12779 true Scaffold2418: 96679-109457 Capsella grandiflora
Cagra.2418s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold2418: 96679-106678 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370279 5261 Brassicaceae View MSA
123833275 5264 Brassicales-Malvales View MSA
124344105 5266 SBM View MSA
124253972 5268 Malvidae View MSA
124062367 5270 Rosid View MSA
123750437 5271 Pentapetalae View MSA
122790105 5272 Eudicot View MSA
122045079 5273 Angiosperm View MSA
121345520 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain