Gene : Cagra.2383s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR13609 - UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED Genomic Order:  2
Name:  ? Cagra.2383s0002 Secondary Identifier:  ? PAC:28900351
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2383s0002 0.5kb upstream 0.5kb upstream 2691 true Scaffold2383: 5002-7692 Capsella grandiflora
Cagra.2383s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold2383: 7193-7692 Capsella grandiflora
Cagra.2383s0002 0.5kb downstream 0.5kb downstream 2691 true Scaffold2383: 4502-7192 Capsella grandiflora
Cagra.2383s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold2383: 4502-5001 Capsella grandiflora
Cagra.2383s0002 1.0kb upstream 1.0kb upstream 3191 true Scaffold2383: 5002-8192 Capsella grandiflora
Cagra.2383s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold2383: 7193-8192 Capsella grandiflora
Cagra.2383s0002 1.0kb downstream 1.0kb downstream 3191 true Scaffold2383: 4002-7192 Capsella grandiflora
Cagra.2383s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold2383: 4002-5001 Capsella grandiflora
Cagra.2383s0002 2.0kb upstream 2.0kb upstream 4191 true Scaffold2383: 5002-9192 Capsella grandiflora
Cagra.2383s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold2383: 7193-9192 Capsella grandiflora
Cagra.2383s0002 2.0kb downstream 2.0kb downstream 4191 true Scaffold2383: 3002-7192 Capsella grandiflora
Cagra.2383s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold2383: 3002-5001 Capsella grandiflora
Cagra.2383s0002 5.0kb upstream 5.0kb upstream 7191 true Scaffold2383: 5002-12192 Capsella grandiflora
Cagra.2383s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold2383: 7193-12192 Capsella grandiflora
Cagra.2383s0002 5.0kb downstream 5.0kb downstream 7191 true Scaffold2383: 2-7192 Capsella grandiflora
Cagra.2383s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold2383: 2-5001 Capsella grandiflora
Cagra.2383s0002 10.0kb upstream 10.0kb upstream 12191 true Scaffold2383: 5002-17192 Capsella grandiflora
Cagra.2383s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold2383: 7193-17192 Capsella grandiflora
Cagra.2383s0002 10.0kb downstream 10.0kb downstream 7192 true Scaffold2383: 1-7192 Capsella grandiflora
Cagra.2383s0002 10.0kb downstream 10.0kb downstream 5001 false Scaffold2383: 1-5001 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363701 5261 Brassicaceae View MSA
123835839 5264 Brassicales-Malvales View MSA
124351635 5266 SBM View MSA
124241327 5268 Malvidae View MSA
124072522 5270 Rosid View MSA
123744132 5271 Pentapetalae View MSA
122790958 5272 Eudicot View MSA
122048669 5273 Angiosperm View MSA
121350639 5274 Embryophyte View MSA
123426786 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain