Gene : Cagra.2350s0087 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22912//PTHR22912:SF183 - DISULFIDE OXIDOREDUCTASE Genomic Order:  87
Name:  ? Cagra.2350s0087 Secondary Identifier:  ? PAC:28908742
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora THIOREDOX-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2350s0087 0.5kb upstream 0.5kb upstream 2316 true Scaffold2350: 331286-333601 Capsella grandiflora
Cagra.2350s0087 0.5kb upstream 0.5kb upstream 500 false Scaffold2350: 331286-331785 Capsella grandiflora
Cagra.2350s0087 0.5kb downstream 0.5kb downstream 2316 true Scaffold2350: 331786-334101 Capsella grandiflora
Cagra.2350s0087 0.5kb downstream 0.5kb downstream 500 false Scaffold2350: 333602-334101 Capsella grandiflora
Cagra.2350s0087 1.0kb upstream 1.0kb upstream 2816 true Scaffold2350: 330786-333601 Capsella grandiflora
Cagra.2350s0087 1.0kb upstream 1.0kb upstream 1000 false Scaffold2350: 330786-331785 Capsella grandiflora
Cagra.2350s0087 1.0kb downstream 1.0kb downstream 2816 true Scaffold2350: 331786-334601 Capsella grandiflora
Cagra.2350s0087 1.0kb downstream 1.0kb downstream 1000 false Scaffold2350: 333602-334601 Capsella grandiflora
Cagra.2350s0087 2.0kb upstream 2.0kb upstream 3816 true Scaffold2350: 329786-333601 Capsella grandiflora
Cagra.2350s0087 2.0kb upstream 2.0kb upstream 2000 false Scaffold2350: 329786-331785 Capsella grandiflora
Cagra.2350s0087 2.0kb downstream 2.0kb downstream 3816 true Scaffold2350: 331786-335601 Capsella grandiflora
Cagra.2350s0087 2.0kb downstream 2.0kb downstream 2000 false Scaffold2350: 333602-335601 Capsella grandiflora
Cagra.2350s0087 5.0kb upstream 5.0kb upstream 6816 true Scaffold2350: 326786-333601 Capsella grandiflora
Cagra.2350s0087 5.0kb upstream 5.0kb upstream 5000 false Scaffold2350: 326786-331785 Capsella grandiflora
Cagra.2350s0087 5.0kb downstream 5.0kb downstream 6816 true Scaffold2350: 331786-338601 Capsella grandiflora
Cagra.2350s0087 5.0kb downstream 5.0kb downstream 5000 false Scaffold2350: 333602-338601 Capsella grandiflora
Cagra.2350s0087 10.0kb upstream 10.0kb upstream 11816 true Scaffold2350: 321786-333601 Capsella grandiflora
Cagra.2350s0087 10.0kb upstream 10.0kb upstream 10000 false Scaffold2350: 321786-331785 Capsella grandiflora
Cagra.2350s0087 10.0kb downstream 10.0kb downstream 11816 true Scaffold2350: 331786-343601 Capsella grandiflora
Cagra.2350s0087 10.0kb downstream 10.0kb downstream 10000 false Scaffold2350: 333602-343601 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371947 5261 Brassicaceae View MSA
123840179 5264 Brassicales-Malvales View MSA
124343686 5266 SBM View MSA
124249529 5268 Malvidae View MSA
124061396 5270 Rosid View MSA
123746891 5271 Pentapetalae View MSA
122793572 5272 Eudicot View MSA
122044945 5273 Angiosperm View MSA
121345859 5274 Embryophyte View MSA
123424818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain