Gene : Cagra.2519s0048 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23515:SF2 - HIGH AFFINITY NITRATE TRANSPORTER 2.3-RELATED Genomic Order:  48
Name:  ? Cagra.2519s0048 Secondary Identifier:  ? PAC:28903949
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2519s0048 0.5kb upstream 0.5kb upstream 2532 true Scaffold2519: 190676-193207 Capsella grandiflora
Cagra.2519s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold2519: 190676-191175 Capsella grandiflora
Cagra.2519s0048 0.5kb downstream 0.5kb downstream 2532 true Scaffold2519: 191176-193707 Capsella grandiflora
Cagra.2519s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold2519: 193208-193707 Capsella grandiflora
Cagra.2519s0048 1.0kb upstream 1.0kb upstream 3032 true Scaffold2519: 190176-193207 Capsella grandiflora
Cagra.2519s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold2519: 190176-191175 Capsella grandiflora
Cagra.2519s0048 1.0kb downstream 1.0kb downstream 3032 true Scaffold2519: 191176-194207 Capsella grandiflora
Cagra.2519s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold2519: 193208-194207 Capsella grandiflora
Cagra.2519s0048 2.0kb upstream 2.0kb upstream 4032 true Scaffold2519: 189176-193207 Capsella grandiflora
Cagra.2519s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold2519: 189176-191175 Capsella grandiflora
Cagra.2519s0048 2.0kb downstream 2.0kb downstream 4032 true Scaffold2519: 191176-195207 Capsella grandiflora
Cagra.2519s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold2519: 193208-195207 Capsella grandiflora
Cagra.2519s0048 5.0kb upstream 5.0kb upstream 7032 true Scaffold2519: 186176-193207 Capsella grandiflora
Cagra.2519s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold2519: 186176-191175 Capsella grandiflora
Cagra.2519s0048 5.0kb downstream 5.0kb downstream 7032 true Scaffold2519: 191176-198207 Capsella grandiflora
Cagra.2519s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold2519: 193208-198207 Capsella grandiflora
Cagra.2519s0048 10.0kb upstream 10.0kb upstream 12032 true Scaffold2519: 181176-193207 Capsella grandiflora
Cagra.2519s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold2519: 181176-191175 Capsella grandiflora
Cagra.2519s0048 10.0kb downstream 10.0kb downstream 12032 true Scaffold2519: 191176-203207 Capsella grandiflora
Cagra.2519s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold2519: 193208-203207 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376784 5261 Brassicaceae View MSA
123839369 5264 Brassicales-Malvales View MSA
124350411 5266 SBM View MSA
124244779 5268 Malvidae View MSA
124041597 5270 Rosid View MSA
123747168 5271 Pentapetalae View MSA
122786429 5272 Eudicot View MSA
122041882 5273 Angiosperm View MSA
121350710 5274 Embryophyte View MSA
123426832 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain