Gene : Cagra.2519s0047 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23515:SF3 - HIGH AFFINITY NITRATE TRANSPORTER 2.5 Genomic Order:  47
Name:  ? Cagra.2519s0047 Secondary Identifier:  ? PAC:28903959
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2519s0047 0.5kb upstream 0.5kb upstream 3157 true Scaffold2519: 184815-187971 Capsella grandiflora
Cagra.2519s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold2519: 184815-185314 Capsella grandiflora
Cagra.2519s0047 0.5kb downstream 0.5kb downstream 3157 true Scaffold2519: 185315-188471 Capsella grandiflora
Cagra.2519s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold2519: 187972-188471 Capsella grandiflora
Cagra.2519s0047 1.0kb upstream 1.0kb upstream 3657 true Scaffold2519: 184315-187971 Capsella grandiflora
Cagra.2519s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold2519: 184315-185314 Capsella grandiflora
Cagra.2519s0047 1.0kb downstream 1.0kb downstream 3657 true Scaffold2519: 185315-188971 Capsella grandiflora
Cagra.2519s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold2519: 187972-188971 Capsella grandiflora
Cagra.2519s0047 2.0kb upstream 2.0kb upstream 4657 true Scaffold2519: 183315-187971 Capsella grandiflora
Cagra.2519s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold2519: 183315-185314 Capsella grandiflora
Cagra.2519s0047 2.0kb downstream 2.0kb downstream 4657 true Scaffold2519: 185315-189971 Capsella grandiflora
Cagra.2519s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold2519: 187972-189971 Capsella grandiflora
Cagra.2519s0047 5.0kb upstream 5.0kb upstream 7657 true Scaffold2519: 180315-187971 Capsella grandiflora
Cagra.2519s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold2519: 180315-185314 Capsella grandiflora
Cagra.2519s0047 5.0kb downstream 5.0kb downstream 7657 true Scaffold2519: 185315-192971 Capsella grandiflora
Cagra.2519s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold2519: 187972-192971 Capsella grandiflora
Cagra.2519s0047 10.0kb upstream 10.0kb upstream 12657 true Scaffold2519: 175315-187971 Capsella grandiflora
Cagra.2519s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold2519: 175315-185314 Capsella grandiflora
Cagra.2519s0047 10.0kb downstream 10.0kb downstream 12657 true Scaffold2519: 185315-197971 Capsella grandiflora
Cagra.2519s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold2519: 187972-197971 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364547 5261 Brassicaceae View MSA
123839123 5264 Brassicales-Malvales View MSA
124337084 5266 SBM View MSA
124246816 5268 Malvidae View MSA
124073805 5270 Rosid View MSA
123747168 5271 Pentapetalae View MSA
122786429 5272 Eudicot View MSA
122041882 5273 Angiosperm View MSA
121350710 5274 Embryophyte View MSA
123426832 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain