Gene : Cagra.2519s0050 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22814:SF100 - HEAVY METAL TRANSPORT/DETOXIFICATION DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  50
Name:  ? Cagra.2519s0050 Secondary Identifier:  ? PAC:28903937
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2519s0050 0.5kb upstream 0.5kb upstream 2177 true Scaffold2519: 201876-204052 Capsella grandiflora
Cagra.2519s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold2519: 203553-204052 Capsella grandiflora
Cagra.2519s0050 0.5kb downstream 0.5kb downstream 2177 true Scaffold2519: 201376-203552 Capsella grandiflora
Cagra.2519s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold2519: 201376-201875 Capsella grandiflora
Cagra.2519s0050 1.0kb upstream 1.0kb upstream 2677 true Scaffold2519: 201876-204552 Capsella grandiflora
Cagra.2519s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold2519: 203553-204552 Capsella grandiflora
Cagra.2519s0050 1.0kb downstream 1.0kb downstream 2677 true Scaffold2519: 200876-203552 Capsella grandiflora
Cagra.2519s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold2519: 200876-201875 Capsella grandiflora
Cagra.2519s0050 2.0kb upstream 2.0kb upstream 3677 true Scaffold2519: 201876-205552 Capsella grandiflora
Cagra.2519s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold2519: 203553-205552 Capsella grandiflora
Cagra.2519s0050 2.0kb downstream 2.0kb downstream 3677 true Scaffold2519: 199876-203552 Capsella grandiflora
Cagra.2519s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold2519: 199876-201875 Capsella grandiflora
Cagra.2519s0050 5.0kb upstream 5.0kb upstream 6677 true Scaffold2519: 201876-208552 Capsella grandiflora
Cagra.2519s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold2519: 203553-208552 Capsella grandiflora
Cagra.2519s0050 5.0kb downstream 5.0kb downstream 6677 true Scaffold2519: 196876-203552 Capsella grandiflora
Cagra.2519s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold2519: 196876-201875 Capsella grandiflora
Cagra.2519s0050 10.0kb upstream 10.0kb upstream 11677 true Scaffold2519: 201876-213552 Capsella grandiflora
Cagra.2519s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold2519: 203553-213552 Capsella grandiflora
Cagra.2519s0050 10.0kb downstream 10.0kb downstream 11677 true Scaffold2519: 191876-203552 Capsella grandiflora
Cagra.2519s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold2519: 191876-201875 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361887 5261 Brassicaceae View MSA
123839566 5264 Brassicales-Malvales View MSA
124346614 5266 SBM View MSA
124250176 5268 Malvidae View MSA
124064314 5270 Rosid View MSA
123746961 5271 Pentapetalae View MSA
122796317 5272 Eudicot View MSA
122045466 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain