Gene : Cagra.2350s0055 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11465 - CATALASE Genomic Order:  55
Name:  ? Cagra.2350s0055 Secondary Identifier:  ? PAC:28908730
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora DETOX1-PWY Capsella grandiflora pathologic  
Cgrandiflora DETOX1-PWY-1 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2350s0055 0.5kb upstream 0.5kb upstream 3313 true Scaffold2350: 198945-202257 Capsella grandiflora
Cagra.2350s0055 0.5kb upstream 0.5kb upstream 500 false Scaffold2350: 201758-202257 Capsella grandiflora
Cagra.2350s0055 0.5kb downstream 0.5kb downstream 3313 true Scaffold2350: 198445-201757 Capsella grandiflora
Cagra.2350s0055 0.5kb downstream 0.5kb downstream 500 false Scaffold2350: 198445-198944 Capsella grandiflora
Cagra.2350s0055 1.0kb upstream 1.0kb upstream 3813 true Scaffold2350: 198945-202757 Capsella grandiflora
Cagra.2350s0055 1.0kb upstream 1.0kb upstream 1000 false Scaffold2350: 201758-202757 Capsella grandiflora
Cagra.2350s0055 1.0kb downstream 1.0kb downstream 3813 true Scaffold2350: 197945-201757 Capsella grandiflora
Cagra.2350s0055 1.0kb downstream 1.0kb downstream 1000 false Scaffold2350: 197945-198944 Capsella grandiflora
Cagra.2350s0055 2.0kb upstream 2.0kb upstream 4813 true Scaffold2350: 198945-203757 Capsella grandiflora
Cagra.2350s0055 2.0kb upstream 2.0kb upstream 2000 false Scaffold2350: 201758-203757 Capsella grandiflora
Cagra.2350s0055 2.0kb downstream 2.0kb downstream 4813 true Scaffold2350: 196945-201757 Capsella grandiflora
Cagra.2350s0055 2.0kb downstream 2.0kb downstream 2000 false Scaffold2350: 196945-198944 Capsella grandiflora
Cagra.2350s0055 5.0kb upstream 5.0kb upstream 7813 true Scaffold2350: 198945-206757 Capsella grandiflora
Cagra.2350s0055 5.0kb upstream 5.0kb upstream 5000 false Scaffold2350: 201758-206757 Capsella grandiflora
Cagra.2350s0055 5.0kb downstream 5.0kb downstream 7813 true Scaffold2350: 193945-201757 Capsella grandiflora
Cagra.2350s0055 5.0kb downstream 5.0kb downstream 5000 false Scaffold2350: 193945-198944 Capsella grandiflora
Cagra.2350s0055 10.0kb upstream 10.0kb upstream 12813 true Scaffold2350: 198945-211757 Capsella grandiflora
Cagra.2350s0055 10.0kb upstream 10.0kb upstream 10000 false Scaffold2350: 201758-211757 Capsella grandiflora
Cagra.2350s0055 10.0kb downstream 10.0kb downstream 12813 true Scaffold2350: 188945-201757 Capsella grandiflora
Cagra.2350s0055 10.0kb downstream 10.0kb downstream 10000 false Scaffold2350: 188945-198944 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040958 5273 Angiosperm View MSA
122367611 5261 Brassicaceae View MSA
123837299 5264 Brassicales-Malvales View MSA
124338278 5266 SBM View MSA
124254242 5268 Malvidae View MSA
124061092 5270 Rosid View MSA
123744547 5271 Pentapetalae View MSA
122789351 5272 Eudicot View MSA
121344781 5274 Embryophyte View MSA
123424047 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain