Gene : Cagra.2515s0054 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31356:SF10 - L-ASCORBATE PEROXIDASE 2, CYTOSOLIC Genomic Order:  54
Name:  ? Cagra.2515s0054 Secondary Identifier:  ? PAC:28894401
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-2261 Capsella grandiflora pathologic  
Cgrandiflora PWY-6959 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2515s0054 0.5kb upstream 0.5kb upstream 2599 true Scaffold2515: 162523-165121 Capsella grandiflora
Cagra.2515s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold2515: 162523-163022 Capsella grandiflora
Cagra.2515s0054 0.5kb downstream 0.5kb downstream 2599 true Scaffold2515: 163023-165621 Capsella grandiflora
Cagra.2515s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold2515: 165122-165621 Capsella grandiflora
Cagra.2515s0054 1.0kb upstream 1.0kb upstream 3099 true Scaffold2515: 162023-165121 Capsella grandiflora
Cagra.2515s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold2515: 162023-163022 Capsella grandiflora
Cagra.2515s0054 1.0kb downstream 1.0kb downstream 3099 true Scaffold2515: 163023-166121 Capsella grandiflora
Cagra.2515s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold2515: 165122-166121 Capsella grandiflora
Cagra.2515s0054 2.0kb upstream 2.0kb upstream 4099 true Scaffold2515: 161023-165121 Capsella grandiflora
Cagra.2515s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold2515: 161023-163022 Capsella grandiflora
Cagra.2515s0054 2.0kb downstream 2.0kb downstream 4099 true Scaffold2515: 163023-167121 Capsella grandiflora
Cagra.2515s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold2515: 165122-167121 Capsella grandiflora
Cagra.2515s0054 5.0kb upstream 5.0kb upstream 7099 true Scaffold2515: 158023-165121 Capsella grandiflora
Cagra.2515s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold2515: 158023-163022 Capsella grandiflora
Cagra.2515s0054 5.0kb downstream 5.0kb downstream 7099 true Scaffold2515: 163023-170121 Capsella grandiflora
Cagra.2515s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold2515: 165122-170121 Capsella grandiflora
Cagra.2515s0054 10.0kb upstream 10.0kb upstream 12099 true Scaffold2515: 153023-165121 Capsella grandiflora
Cagra.2515s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold2515: 153023-163022 Capsella grandiflora
Cagra.2515s0054 10.0kb downstream 10.0kb downstream 12099 true Scaffold2515: 163023-175121 Capsella grandiflora
Cagra.2515s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold2515: 165122-175121 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372503 5261 Brassicaceae View MSA
123833183 5264 Brassicales-Malvales View MSA
124345935 5266 SBM View MSA
124248895 5268 Malvidae View MSA
124068994 5270 Rosid View MSA
123741454 5271 Pentapetalae View MSA
122796920 5272 Eudicot View MSA
122044564 5273 Angiosperm View MSA
121344996 5274 Embryophyte View MSA
123426233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain