Gene : Cagra.2515s0053 C. grandiflora v1.1
Defline:  (1 of 3) PTHR19431 - 60S RIBOSOMAL PROTEIN L4 Genomic Order:  53
Name:  ? Cagra.2515s0053 Secondary Identifier:  ? PAC:28894408
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2515s0053 0.5kb upstream 0.5kb upstream 2241 true Scaffold2515: 160173-162413 Capsella grandiflora
Cagra.2515s0053 0.5kb upstream 0.5kb upstream 500 false Scaffold2515: 160173-160672 Capsella grandiflora
Cagra.2515s0053 0.5kb downstream 0.5kb downstream 2241 true Scaffold2515: 160673-162913 Capsella grandiflora
Cagra.2515s0053 0.5kb downstream 0.5kb downstream 500 false Scaffold2515: 162414-162913 Capsella grandiflora
Cagra.2515s0053 1.0kb upstream 1.0kb upstream 2741 true Scaffold2515: 159673-162413 Capsella grandiflora
Cagra.2515s0053 1.0kb upstream 1.0kb upstream 1000 false Scaffold2515: 159673-160672 Capsella grandiflora
Cagra.2515s0053 1.0kb downstream 1.0kb downstream 2741 true Scaffold2515: 160673-163413 Capsella grandiflora
Cagra.2515s0053 1.0kb downstream 1.0kb downstream 1000 false Scaffold2515: 162414-163413 Capsella grandiflora
Cagra.2515s0053 2.0kb upstream 2.0kb upstream 3741 true Scaffold2515: 158673-162413 Capsella grandiflora
Cagra.2515s0053 2.0kb upstream 2.0kb upstream 2000 false Scaffold2515: 158673-160672 Capsella grandiflora
Cagra.2515s0053 2.0kb downstream 2.0kb downstream 3741 true Scaffold2515: 160673-164413 Capsella grandiflora
Cagra.2515s0053 2.0kb downstream 2.0kb downstream 2000 false Scaffold2515: 162414-164413 Capsella grandiflora
Cagra.2515s0053 5.0kb upstream 5.0kb upstream 6741 true Scaffold2515: 155673-162413 Capsella grandiflora
Cagra.2515s0053 5.0kb upstream 5.0kb upstream 5000 false Scaffold2515: 155673-160672 Capsella grandiflora
Cagra.2515s0053 5.0kb downstream 5.0kb downstream 6741 true Scaffold2515: 160673-167413 Capsella grandiflora
Cagra.2515s0053 5.0kb downstream 5.0kb downstream 5000 false Scaffold2515: 162414-167413 Capsella grandiflora
Cagra.2515s0053 10.0kb upstream 10.0kb upstream 11741 true Scaffold2515: 150673-162413 Capsella grandiflora
Cagra.2515s0053 10.0kb upstream 10.0kb upstream 10000 false Scaffold2515: 150673-160672 Capsella grandiflora
Cagra.2515s0053 10.0kb downstream 10.0kb downstream 11741 true Scaffold2515: 160673-172413 Capsella grandiflora
Cagra.2515s0053 10.0kb downstream 10.0kb downstream 10000 false Scaffold2515: 162414-172413 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378751 5261 Brassicaceae View MSA
123838506 5264 Brassicales-Malvales View MSA
124338164 5266 SBM View MSA
124247751 5268 Malvidae View MSA
124063990 5270 Rosid View MSA
123739316 5271 Pentapetalae View MSA
122788989 5272 Eudicot View MSA
122046079 5273 Angiosperm View MSA
121350172 5274 Embryophyte View MSA
123424794 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain