Gene : Cagra.2515s0057 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22981:SF71 - PWWP DOMAIN-CONTAINING PROTEIN Genomic Order:  57
Name:  ? Cagra.2515s0057 Secondary Identifier:  ? PAC:28894427
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2515s0057 0.5kb upstream 0.5kb upstream 3163 true Scaffold2515: 172849-176011 Capsella grandiflora
Cagra.2515s0057 0.5kb upstream 0.5kb upstream 500 false Scaffold2515: 172849-173348 Capsella grandiflora
Cagra.2515s0057 0.5kb downstream 0.5kb downstream 3163 true Scaffold2515: 173349-176511 Capsella grandiflora
Cagra.2515s0057 0.5kb downstream 0.5kb downstream 500 false Scaffold2515: 176012-176511 Capsella grandiflora
Cagra.2515s0057 1.0kb upstream 1.0kb upstream 3663 true Scaffold2515: 172349-176011 Capsella grandiflora
Cagra.2515s0057 1.0kb upstream 1.0kb upstream 1000 false Scaffold2515: 172349-173348 Capsella grandiflora
Cagra.2515s0057 1.0kb downstream 1.0kb downstream 3663 true Scaffold2515: 173349-177011 Capsella grandiflora
Cagra.2515s0057 1.0kb downstream 1.0kb downstream 1000 false Scaffold2515: 176012-177011 Capsella grandiflora
Cagra.2515s0057 2.0kb upstream 2.0kb upstream 4663 true Scaffold2515: 171349-176011 Capsella grandiflora
Cagra.2515s0057 2.0kb upstream 2.0kb upstream 2000 false Scaffold2515: 171349-173348 Capsella grandiflora
Cagra.2515s0057 2.0kb downstream 2.0kb downstream 4663 true Scaffold2515: 173349-178011 Capsella grandiflora
Cagra.2515s0057 2.0kb downstream 2.0kb downstream 2000 false Scaffold2515: 176012-178011 Capsella grandiflora
Cagra.2515s0057 5.0kb upstream 5.0kb upstream 7663 true Scaffold2515: 168349-176011 Capsella grandiflora
Cagra.2515s0057 5.0kb upstream 5.0kb upstream 5000 false Scaffold2515: 168349-173348 Capsella grandiflora
Cagra.2515s0057 5.0kb downstream 5.0kb downstream 7663 true Scaffold2515: 173349-181011 Capsella grandiflora
Cagra.2515s0057 5.0kb downstream 5.0kb downstream 5000 false Scaffold2515: 176012-181011 Capsella grandiflora
Cagra.2515s0057 10.0kb upstream 10.0kb upstream 12663 true Scaffold2515: 163349-176011 Capsella grandiflora
Cagra.2515s0057 10.0kb upstream 10.0kb upstream 10000 false Scaffold2515: 163349-173348 Capsella grandiflora
Cagra.2515s0057 10.0kb downstream 10.0kb downstream 12663 true Scaffold2515: 173349-186011 Capsella grandiflora
Cagra.2515s0057 10.0kb downstream 10.0kb downstream 10000 false Scaffold2515: 176012-186011 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343245 5261 Brassicaceae View MSA
123783501 5264 Brassicales-Malvales View MSA
124281731 5266 SBM View MSA
124251162 5268 Malvidae View MSA
124071985 5270 Rosid View MSA
123749922 5271 Pentapetalae View MSA
122795074 5272 Eudicot View MSA
122049561 5273 Angiosperm View MSA
121311475 5274 Embryophyte View MSA
123348768 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain