Gene : Cagra.2515s0070 C. grandiflora v1.1
Defline:  (1 of 5) 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase Genomic Order:  70
Name:  ? Cagra.2515s0070 Secondary Identifier:  ? PAC:28894418
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  
Cgrandiflora PWY-5690 Capsella grandiflora pathologic  
Cgrandiflora PWY-6549 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2515s0070 0.5kb upstream 0.5kb upstream 3167 true Scaffold2515: 214022-217188 Capsella grandiflora
Cagra.2515s0070 0.5kb upstream 0.5kb upstream 500 false Scaffold2515: 214022-214521 Capsella grandiflora
Cagra.2515s0070 0.5kb downstream 0.5kb downstream 3167 true Scaffold2515: 214522-217688 Capsella grandiflora
Cagra.2515s0070 0.5kb downstream 0.5kb downstream 500 false Scaffold2515: 217189-217688 Capsella grandiflora
Cagra.2515s0070 1.0kb upstream 1.0kb upstream 3667 true Scaffold2515: 213522-217188 Capsella grandiflora
Cagra.2515s0070 1.0kb upstream 1.0kb upstream 1000 false Scaffold2515: 213522-214521 Capsella grandiflora
Cagra.2515s0070 1.0kb downstream 1.0kb downstream 3667 true Scaffold2515: 214522-218188 Capsella grandiflora
Cagra.2515s0070 1.0kb downstream 1.0kb downstream 1000 false Scaffold2515: 217189-218188 Capsella grandiflora
Cagra.2515s0070 2.0kb upstream 2.0kb upstream 4667 true Scaffold2515: 212522-217188 Capsella grandiflora
Cagra.2515s0070 2.0kb upstream 2.0kb upstream 2000 false Scaffold2515: 212522-214521 Capsella grandiflora
Cagra.2515s0070 2.0kb downstream 2.0kb downstream 4667 true Scaffold2515: 214522-219188 Capsella grandiflora
Cagra.2515s0070 2.0kb downstream 2.0kb downstream 2000 false Scaffold2515: 217189-219188 Capsella grandiflora
Cagra.2515s0070 5.0kb upstream 5.0kb upstream 7667 true Scaffold2515: 209522-217188 Capsella grandiflora
Cagra.2515s0070 5.0kb upstream 5.0kb upstream 5000 false Scaffold2515: 209522-214521 Capsella grandiflora
Cagra.2515s0070 5.0kb downstream 5.0kb downstream 7667 true Scaffold2515: 214522-222188 Capsella grandiflora
Cagra.2515s0070 5.0kb downstream 5.0kb downstream 5000 false Scaffold2515: 217189-222188 Capsella grandiflora
Cagra.2515s0070 10.0kb upstream 10.0kb upstream 12667 true Scaffold2515: 204522-217188 Capsella grandiflora
Cagra.2515s0070 10.0kb upstream 10.0kb upstream 10000 false Scaffold2515: 204522-214521 Capsella grandiflora
Cagra.2515s0070 10.0kb downstream 10.0kb downstream 12667 true Scaffold2515: 214522-227188 Capsella grandiflora
Cagra.2515s0070 10.0kb downstream 10.0kb downstream 10000 false Scaffold2515: 217189-227188 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510628 5273 Angiosperm View MSA
122366336 5261 Brassicaceae View MSA
123799151 5264 Brassicales-Malvales View MSA
124296699 5266 SBM View MSA
124148776 5268 Malvidae View MSA
123874707 5270 Rosid View MSA
123458637 5271 Pentapetalae View MSA
122494038 5272 Eudicot View MSA
120783717 5274 Embryophyte View MSA
123425496 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain