Gene : Cagra.2306s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR30612:SF5 - PROTEIN TRANSLOCASE SUBUNIT SECA2, CHLOROPLASTIC Genomic Order:  10
Name:  ? Cagra.2306s0010 Secondary Identifier:  ? PAC:28914820
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2306s0010 0.5kb upstream 0.5kb upstream 8973 true Scaffold2306: 44787-53759 Capsella grandiflora
Cagra.2306s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold2306: 53260-53759 Capsella grandiflora
Cagra.2306s0010 0.5kb downstream 0.5kb downstream 8973 true Scaffold2306: 44287-53259 Capsella grandiflora
Cagra.2306s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold2306: 44287-44786 Capsella grandiflora
Cagra.2306s0010 1.0kb upstream 1.0kb upstream 9473 true Scaffold2306: 44787-54259 Capsella grandiflora
Cagra.2306s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold2306: 53260-54259 Capsella grandiflora
Cagra.2306s0010 1.0kb downstream 1.0kb downstream 9473 true Scaffold2306: 43787-53259 Capsella grandiflora
Cagra.2306s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold2306: 43787-44786 Capsella grandiflora
Cagra.2306s0010 2.0kb upstream 2.0kb upstream 10473 true Scaffold2306: 44787-55259 Capsella grandiflora
Cagra.2306s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold2306: 53260-55259 Capsella grandiflora
Cagra.2306s0010 2.0kb downstream 2.0kb downstream 10473 true Scaffold2306: 42787-53259 Capsella grandiflora
Cagra.2306s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold2306: 42787-44786 Capsella grandiflora
Cagra.2306s0010 5.0kb upstream 5.0kb upstream 13473 true Scaffold2306: 44787-58259 Capsella grandiflora
Cagra.2306s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold2306: 53260-58259 Capsella grandiflora
Cagra.2306s0010 5.0kb downstream 5.0kb downstream 13473 true Scaffold2306: 39787-53259 Capsella grandiflora
Cagra.2306s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold2306: 39787-44786 Capsella grandiflora
Cagra.2306s0010 10.0kb upstream 10.0kb upstream 18473 true Scaffold2306: 44787-63259 Capsella grandiflora
Cagra.2306s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold2306: 53260-63259 Capsella grandiflora
Cagra.2306s0010 10.0kb downstream 10.0kb downstream 18473 true Scaffold2306: 34787-53259 Capsella grandiflora
Cagra.2306s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold2306: 34787-44786 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372447 5261 Brassicaceae View MSA
123834874 5264 Brassicales-Malvales View MSA
124337353 5266 SBM View MSA
124242672 5268 Malvidae View MSA
124067492 5270 Rosid View MSA
123740591 5271 Pentapetalae View MSA
122790576 5272 Eudicot View MSA
122047276 5273 Angiosperm View MSA
121346470 5274 Embryophyte View MSA
123428614 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain