Gene : Cagra.2306s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR20275:SF6 - NADH KINASE POS5, MITOCHONDRIAL Genomic Order:  9
Name:  ? Cagra.2306s0009 Secondary Identifier:  ? PAC:28914843
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5083 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2306s0009 0.5kb upstream 0.5kb upstream 4795 true Scaffold2306: 39816-44610 Capsella grandiflora
Cagra.2306s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold2306: 39816-40315 Capsella grandiflora
Cagra.2306s0009 0.5kb downstream 0.5kb downstream 4795 true Scaffold2306: 40316-45110 Capsella grandiflora
Cagra.2306s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold2306: 44611-45110 Capsella grandiflora
Cagra.2306s0009 1.0kb upstream 1.0kb upstream 5295 true Scaffold2306: 39316-44610 Capsella grandiflora
Cagra.2306s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold2306: 39316-40315 Capsella grandiflora
Cagra.2306s0009 1.0kb downstream 1.0kb downstream 5295 true Scaffold2306: 40316-45610 Capsella grandiflora
Cagra.2306s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold2306: 44611-45610 Capsella grandiflora
Cagra.2306s0009 2.0kb upstream 2.0kb upstream 6295 true Scaffold2306: 38316-44610 Capsella grandiflora
Cagra.2306s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold2306: 38316-40315 Capsella grandiflora
Cagra.2306s0009 2.0kb downstream 2.0kb downstream 6295 true Scaffold2306: 40316-46610 Capsella grandiflora
Cagra.2306s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold2306: 44611-46610 Capsella grandiflora
Cagra.2306s0009 5.0kb upstream 5.0kb upstream 9295 true Scaffold2306: 35316-44610 Capsella grandiflora
Cagra.2306s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold2306: 35316-40315 Capsella grandiflora
Cagra.2306s0009 5.0kb downstream 5.0kb downstream 9295 true Scaffold2306: 40316-49610 Capsella grandiflora
Cagra.2306s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold2306: 44611-49610 Capsella grandiflora
Cagra.2306s0009 10.0kb upstream 10.0kb upstream 14295 true Scaffold2306: 30316-44610 Capsella grandiflora
Cagra.2306s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold2306: 30316-40315 Capsella grandiflora
Cagra.2306s0009 10.0kb downstream 10.0kb downstream 14295 true Scaffold2306: 40316-54610 Capsella grandiflora
Cagra.2306s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold2306: 44611-54610 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366031 5261 Brassicaceae View MSA
123835943 5264 Brassicales-Malvales View MSA
124340798 5266 SBM View MSA
124251776 5268 Malvidae View MSA
124068883 5270 Rosid View MSA
123747972 5271 Pentapetalae View MSA
122793469 5272 Eudicot View MSA
122042984 5273 Angiosperm View MSA
121349739 5274 Embryophyte View MSA
123425454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain