Gene : Cagra.2306s0029 C. grandiflora v1.1
Defline:  (1 of 6) PF05340 - Protein of unknown function (DUF740) (DUF740) Genomic Order:  29
Name:  ? Cagra.2306s0029 Secondary Identifier:  ? PAC:28914817
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2306s0029 0.5kb upstream 0.5kb upstream 1846 true Scaffold2306: 118766-120611 Capsella grandiflora
Cagra.2306s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold2306: 120112-120611 Capsella grandiflora
Cagra.2306s0029 0.5kb downstream 0.5kb downstream 1846 true Scaffold2306: 118266-120111 Capsella grandiflora
Cagra.2306s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold2306: 118266-118765 Capsella grandiflora
Cagra.2306s0029 1.0kb upstream 1.0kb upstream 2346 true Scaffold2306: 118766-121111 Capsella grandiflora
Cagra.2306s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold2306: 120112-121111 Capsella grandiflora
Cagra.2306s0029 1.0kb downstream 1.0kb downstream 2346 true Scaffold2306: 117766-120111 Capsella grandiflora
Cagra.2306s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold2306: 117766-118765 Capsella grandiflora
Cagra.2306s0029 2.0kb upstream 2.0kb upstream 3346 true Scaffold2306: 118766-122111 Capsella grandiflora
Cagra.2306s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold2306: 120112-122111 Capsella grandiflora
Cagra.2306s0029 2.0kb downstream 2.0kb downstream 3346 true Scaffold2306: 116766-120111 Capsella grandiflora
Cagra.2306s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold2306: 116766-118765 Capsella grandiflora
Cagra.2306s0029 5.0kb upstream 5.0kb upstream 6346 true Scaffold2306: 118766-125111 Capsella grandiflora
Cagra.2306s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold2306: 120112-125111 Capsella grandiflora
Cagra.2306s0029 5.0kb downstream 5.0kb downstream 6346 true Scaffold2306: 113766-120111 Capsella grandiflora
Cagra.2306s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold2306: 113766-118765 Capsella grandiflora
Cagra.2306s0029 10.0kb upstream 10.0kb upstream 11346 true Scaffold2306: 118766-130111 Capsella grandiflora
Cagra.2306s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold2306: 120112-130111 Capsella grandiflora
Cagra.2306s0029 10.0kb downstream 10.0kb downstream 11346 true Scaffold2306: 108766-120111 Capsella grandiflora
Cagra.2306s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold2306: 108766-118765 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364609 5261 Brassicaceae View MSA
123841021 5264 Brassicales-Malvales View MSA
124340393 5266 SBM View MSA
124243965 5268 Malvidae View MSA
124067867 5270 Rosid View MSA
123750206 5271 Pentapetalae View MSA
122796157 5272 Eudicot View MSA
122043304 5273 Angiosperm View MSA
121310104 5274 Embryophyte View MSA
123347686 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain