Gene : Cagra.2310s0010 C. grandiflora v1.1

Defline:  (1 of 1) PF09758 - Uncharacterised conserved protein (FPL) Genomic Order:  10
Name:  ? Cagra.2310s0010 Secondary Identifier:  ? PAC:28912340

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2310s0010 0.5kb upstream 0.5kb upstream 6493 true Scaffold2310: 47779-54271 Capsella grandiflora
Cagra.2310s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold2310: 53772-54271 Capsella grandiflora
Cagra.2310s0010 0.5kb downstream 0.5kb downstream 6493 true Scaffold2310: 47279-53771 Capsella grandiflora
Cagra.2310s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold2310: 47279-47778 Capsella grandiflora
Cagra.2310s0010 1.0kb upstream 1.0kb upstream 6993 true Scaffold2310: 47779-54771 Capsella grandiflora
Cagra.2310s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold2310: 53772-54771 Capsella grandiflora
Cagra.2310s0010 1.0kb downstream 1.0kb downstream 6993 true Scaffold2310: 46779-53771 Capsella grandiflora
Cagra.2310s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold2310: 46779-47778 Capsella grandiflora
Cagra.2310s0010 2.0kb upstream 2.0kb upstream 7993 true Scaffold2310: 47779-55771 Capsella grandiflora
Cagra.2310s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold2310: 53772-55771 Capsella grandiflora
Cagra.2310s0010 2.0kb downstream 2.0kb downstream 7993 true Scaffold2310: 45779-53771 Capsella grandiflora
Cagra.2310s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold2310: 45779-47778 Capsella grandiflora
Cagra.2310s0010 5.0kb upstream 5.0kb upstream 10993 true Scaffold2310: 47779-58771 Capsella grandiflora
Cagra.2310s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold2310: 53772-58771 Capsella grandiflora
Cagra.2310s0010 5.0kb downstream 5.0kb downstream 10993 true Scaffold2310: 42779-53771 Capsella grandiflora
Cagra.2310s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold2310: 42779-47778 Capsella grandiflora
Cagra.2310s0010 10.0kb upstream 10.0kb upstream 15993 true Scaffold2310: 47779-63771 Capsella grandiflora
Cagra.2310s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold2310: 53772-63771 Capsella grandiflora
Cagra.2310s0010 10.0kb downstream 10.0kb downstream 15993 true Scaffold2310: 37779-53771 Capsella grandiflora
Cagra.2310s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold2310: 37779-47778 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363104 5261 Brassicaceae View MSA
123841483 5264 Brassicales-Malvales View MSA
124337287 5266 SBM View MSA
124250806 5268 Malvidae View MSA
124060914 5270 Rosid View MSA
123749993 5271 Pentapetalae View MSA
122788066 5272 Eudicot View MSA
122048485 5273 Angiosperm View MSA
121345200 5274 Embryophyte View MSA
123428474 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain