Gene : Cagra.2328s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13164:SF7 - COP1-INTERACTING PROTEIN 4-RELATED Genomic Order:  1
Name:  ? Cagra.2328s0001 Secondary Identifier:  ? PAC:28906768
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2328s0001 0.5kb upstream 0.5kb upstream 5119 true Scaffold2328: 4575-9693 Capsella grandiflora
Cagra.2328s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2328: 4575-5074 Capsella grandiflora
Cagra.2328s0001 0.5kb downstream 0.5kb downstream 5119 true Scaffold2328: 5075-10193 Capsella grandiflora
Cagra.2328s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2328: 9694-10193 Capsella grandiflora
Cagra.2328s0001 1.0kb upstream 1.0kb upstream 5619 true Scaffold2328: 4075-9693 Capsella grandiflora
Cagra.2328s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2328: 4075-5074 Capsella grandiflora
Cagra.2328s0001 1.0kb downstream 1.0kb downstream 5619 true Scaffold2328: 5075-10693 Capsella grandiflora
Cagra.2328s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2328: 9694-10693 Capsella grandiflora
Cagra.2328s0001 2.0kb upstream 2.0kb upstream 6619 true Scaffold2328: 3075-9693 Capsella grandiflora
Cagra.2328s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2328: 3075-5074 Capsella grandiflora
Cagra.2328s0001 2.0kb downstream 2.0kb downstream 6619 true Scaffold2328: 5075-11693 Capsella grandiflora
Cagra.2328s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2328: 9694-11693 Capsella grandiflora
Cagra.2328s0001 5.0kb upstream 5.0kb upstream 9619 true Scaffold2328: 75-9693 Capsella grandiflora
Cagra.2328s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold2328: 75-5074 Capsella grandiflora
Cagra.2328s0001 5.0kb downstream 5.0kb downstream 9619 true Scaffold2328: 5075-14693 Capsella grandiflora
Cagra.2328s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold2328: 9694-14693 Capsella grandiflora
Cagra.2328s0001 10.0kb upstream 10.0kb upstream 9693 true Scaffold2328: 1-9693 Capsella grandiflora
Cagra.2328s0001 10.0kb upstream 10.0kb upstream 5074 false Scaffold2328: 1-5074 Capsella grandiflora
Cagra.2328s0001 10.0kb downstream 10.0kb downstream 14619 true Scaffold2328: 5075-19693 Capsella grandiflora
Cagra.2328s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold2328: 9694-19693 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377938 5261 Brassicaceae View MSA
123841102 5264 Brassicales-Malvales View MSA
124343739 5266 SBM View MSA
124248012 5268 Malvidae View MSA
124069381 5270 Rosid View MSA
123743976 5271 Pentapetalae View MSA
122793189 5272 Eudicot View MSA
122042859 5273 Angiosperm View MSA
121310036 5274 Embryophyte View MSA
123347639 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain