Gene : Cagra.2941s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19139:SF102 - AQUAPORIN NIP5-1-RELATED Genomic Order:  1
Name:  ? Cagra.2941s0001 Secondary Identifier:  ? PAC:28919889
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2941s0001 0.5kb upstream 0.5kb upstream 4786 true Scaffold2941: 7042-11827 Capsella grandiflora
Cagra.2941s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2941: 7042-7541 Capsella grandiflora
Cagra.2941s0001 0.5kb downstream 0.5kb downstream 4786 true Scaffold2941: 7542-12327 Capsella grandiflora
Cagra.2941s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2941: 11828-12327 Capsella grandiflora
Cagra.2941s0001 1.0kb upstream 1.0kb upstream 5286 true Scaffold2941: 6542-11827 Capsella grandiflora
Cagra.2941s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2941: 6542-7541 Capsella grandiflora
Cagra.2941s0001 1.0kb downstream 1.0kb downstream 5286 true Scaffold2941: 7542-12827 Capsella grandiflora
Cagra.2941s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2941: 11828-12827 Capsella grandiflora
Cagra.2941s0001 2.0kb upstream 2.0kb upstream 6286 true Scaffold2941: 5542-11827 Capsella grandiflora
Cagra.2941s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2941: 5542-7541 Capsella grandiflora
Cagra.2941s0001 2.0kb downstream 2.0kb downstream 6286 true Scaffold2941: 7542-13827 Capsella grandiflora
Cagra.2941s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2941: 11828-13827 Capsella grandiflora
Cagra.2941s0001 5.0kb upstream 5.0kb upstream 9286 true Scaffold2941: 2542-11827 Capsella grandiflora
Cagra.2941s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold2941: 2542-7541 Capsella grandiflora
Cagra.2941s0001 5.0kb downstream 5.0kb downstream 9286 true Scaffold2941: 7542-16827 Capsella grandiflora
Cagra.2941s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold2941: 11828-16827 Capsella grandiflora
Cagra.2941s0001 10.0kb upstream 10.0kb upstream 11827 true Scaffold2941: 1-11827 Capsella grandiflora
Cagra.2941s0001 10.0kb upstream 10.0kb upstream 7541 false Scaffold2941: 1-7541 Capsella grandiflora
Cagra.2941s0001 10.0kb downstream 10.0kb downstream 10304 true Scaffold2941: 7542-17845 Capsella grandiflora
Cagra.2941s0001 10.0kb downstream 10.0kb downstream 6018 false Scaffold2941: 11828-17845 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363541 5261 Brassicaceae View MSA
123829996 5264 Brassicales-Malvales View MSA
124344916 5266 SBM View MSA
124243782 5268 Malvidae View MSA
124067357 5270 Rosid View MSA
123747786 5271 Pentapetalae View MSA
122789550 5272 Eudicot View MSA
122042454 5273 Angiosperm View MSA
121349244 5274 Embryophyte View MSA
123427856 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain