Gene : Cagra.2961s0030 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12555//PTHR12555:SF17 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 Genomic Order:  30
Name:  ? Cagra.2961s0030 Secondary Identifier:  ? PAC:28897460
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2961s0030 0.5kb upstream 0.5kb upstream 3188 true Scaffold2961: 81073-84260 Capsella grandiflora
Cagra.2961s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold2961: 81073-81572 Capsella grandiflora
Cagra.2961s0030 0.5kb downstream 0.5kb downstream 3188 true Scaffold2961: 81573-84760 Capsella grandiflora
Cagra.2961s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold2961: 84261-84760 Capsella grandiflora
Cagra.2961s0030 1.0kb upstream 1.0kb upstream 3688 true Scaffold2961: 80573-84260 Capsella grandiflora
Cagra.2961s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold2961: 80573-81572 Capsella grandiflora
Cagra.2961s0030 1.0kb downstream 1.0kb downstream 3688 true Scaffold2961: 81573-85260 Capsella grandiflora
Cagra.2961s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold2961: 84261-85260 Capsella grandiflora
Cagra.2961s0030 2.0kb upstream 2.0kb upstream 4688 true Scaffold2961: 79573-84260 Capsella grandiflora
Cagra.2961s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold2961: 79573-81572 Capsella grandiflora
Cagra.2961s0030 2.0kb downstream 2.0kb downstream 4688 true Scaffold2961: 81573-86260 Capsella grandiflora
Cagra.2961s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold2961: 84261-86260 Capsella grandiflora
Cagra.2961s0030 5.0kb upstream 5.0kb upstream 7688 true Scaffold2961: 76573-84260 Capsella grandiflora
Cagra.2961s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold2961: 76573-81572 Capsella grandiflora
Cagra.2961s0030 5.0kb downstream 5.0kb downstream 7688 true Scaffold2961: 81573-89260 Capsella grandiflora
Cagra.2961s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold2961: 84261-89260 Capsella grandiflora
Cagra.2961s0030 10.0kb upstream 10.0kb upstream 12688 true Scaffold2961: 71573-84260 Capsella grandiflora
Cagra.2961s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold2961: 71573-81572 Capsella grandiflora
Cagra.2961s0030 10.0kb downstream 10.0kb downstream 12688 true Scaffold2961: 81573-94260 Capsella grandiflora
Cagra.2961s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold2961: 84261-94260 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370340 5261 Brassicaceae View MSA
123839758 5264 Brassicales-Malvales View MSA
124340564 5266 SBM View MSA
124254647 5268 Malvidae View MSA
124066093 5270 Rosid View MSA
123740128 5271 Pentapetalae View MSA
122786879 5272 Eudicot View MSA
122047756 5273 Angiosperm View MSA
123429180 5275 Viridiplantae View MSA
121346012 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain