Protein Family : ubiquitin fusion degradation 1 123429180

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  172

172 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30131.t000289 (1 of 3) K14016 - ubiquitin fusion degradation protein 1 (UFD1) R. communis v0.1 5124   30131: 1772823-1777946
29269.t000014 (1 of 3) K14016 - ubiquitin fusion degradation protein 1 (UFD1) R. communis v0.1 1019   29269: 104673-105691
28650.t000004 (1 of 3) K14016 - ubiquitin fusion degradation protein 1 (UFD1) R. communis v0.1 2339   28650: 20391-22729
Cucsa.377980 (1 of 1) PTHR12555//PTHR12555:SF16 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 C. sativus v1.0 4939   scaffold03806: 444699-449637
orange1.1g020791m.g (1 of 3) PTHR12555//PTHR12555:SF17 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 C. sinensis v1.1 3810   scaffold00225: 33670-37479
orange1.1g047222m.g (1 of 3) PTHR12555//PTHR12555:SF17 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 C. sinensis v1.1 1940   scaffold00014: 127237-129176
AT2G29070 (1 of 3) K14016 - ubiquitin fusion degradation protein 1 (UFD1) A. thaliana TAIR10 2245   Chr2: 12487274-12489518
AT2G21270 (1 of 3) K14016 - ubiquitin fusion degradation protein 1 (UFD1) A. thaliana TAIR10 UFD1 2716   Chr2: 9107546-9110261
Thhalv10016960m.g (1 of 2) PTHR12555//PTHR12555:SF17 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 E. salsugineum v1.0 2159   scaffold_10: 4555967-4558125
Thhalv10000246m.g (1 of 2) PTHR12555//PTHR12555:SF17 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 E. salsugineum v1.0 2699   scaffold_15: 127954-130652
Ciclev10028844m.g (1 of 3) PTHR12555//PTHR12555:SF17 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 C. clementina v1.0 4239   scaffold_8: 6750503-6754741
Ciclev10028767m.g (1 of 3) PTHR12555//PTHR12555:SF17 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 C. clementina v1.0 3186   scaffold_8: 23610901-23614086
Lus10042053.g (1 of 3) PTHR12555//PTHR12555:SF17 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 L. usitatissimum v1.0 2113   scaffold123: 484595-486707
Lus10029298.g (1 of 7) PTHR12555 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 L. usitatissimum v1.0 2515   scaffold360: 520983-523497
Lus10018057.g (1 of 1) PTHR12555//PTHR12555:SF16 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 L. usitatissimum v1.0 2622   scaffold687: 508392-511013
Gorai.003G130200 (1 of 3) PTHR12555//PTHR12555:SF17 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 G. raimondii v2.1 2733   Chr03: 38397651-38400383
Gorai.012G154200 (1 of 3) PTHR12555//PTHR12555:SF17 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 G. raimondii v2.1 3506   Chr12: 32824865-32828370
Gorai.008G032200 (1 of 3) PTHR12555//PTHR12555:SF17 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 G. raimondii v2.1 3160   Chr08: 3858722-3861881
e_gw1.6.231.1 (1 of 1) PTHR12555 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 C. subellipsoidea C-169 v2.0 3825   scaffold_6: 172794-176618
MicpuC2.EuGene.0000030056 (1 of 1) KOG1816 - Ubiquitin fusion-degradation protein M. pusilla CCMP1545 v3.0 1092   scaffold_3: 111966-113057
est_cluster_kg.Chr_03__57__3199252:1 (1 of 2) PTHR23322 - FAS-ASSOCIATED PROTEIN M. sp RCC299 v3.0 1037   Chr_03: 558564-559600
e_gwEuk.9.334.1 (1 of 1) KOG1816 - Ubiquitin fusion-degradation protein O. lucimarinus v2.0 1068   Chr_9: 112125-113192
Thecc1EG006775 (1 of 5) K14016 - ubiquitin fusion degradation protein 1 (UFD1) T. cacao v1.1 3225   scaffold_2: 3676440-3679664
Thecc1EG012323 (1 of 5) K14016 - ubiquitin fusion degradation protein 1 (UFD1) T. cacao v1.1 1280   scaffold_3: 2242907-2244186
Thecc1EG012312 (1 of 5) K14016 - ubiquitin fusion degradation protein 1 (UFD1) T. cacao v1.1 1360   scaffold_3: 2183824-2185183
Thecc1EG012308 (1 of 5) K14016 - ubiquitin fusion degradation protein 1 (UFD1) T. cacao v1.1 1160   scaffold_3: 2147077-2148236
Thecc1EG041807 (1 of 5) K14016 - ubiquitin fusion degradation protein 1 (UFD1) T. cacao v1.1 3067   scaffold_9: 39605870-39608936
Migut.D02074 (1 of 1) PTHR12555//PTHR12555:SF17 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 M. guttatus v2.0 1786   scaffold_4: 17852026-17853811
Migut.E01571 (1 of 7) PTHR12555 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 M. guttatus v2.0 855   scaffold_5: 18209003-18209857
Migut.E01780 (1 of 2) PTHR12555//PTHR12555:SF16 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 M. guttatus v2.0 1010   scaffold_5: 24059663-24060672

172 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g020791m C. sinensis v1.1 123429180 ubiquitin fusion degradation 1 2 5275 Viridiplantae
AT2G29070.2 A. thaliana TAIR10 123429180 ubiquitin fusion degradation 1 2 5275 Viridiplantae
AT2G21270.3 A. thaliana TAIR10 123429180 ubiquitin fusion degradation 1 2 5275 Viridiplantae
Thhalv10016960m E. salsugineum v1.0 123429180 ubiquitin fusion degradation 1 2 5275 Viridiplantae
Thhalv10000246m E. salsugineum v1.0 123429180 ubiquitin fusion degradation 1 2 5275 Viridiplantae
Ciclev10028844m C. clementina v1.0 123429180 ubiquitin fusion degradation 1 2 5275 Viridiplantae
Ciclev10028767m C. clementina v1.0 123429180 ubiquitin fusion degradation 1 2 5275 Viridiplantae
Lus10029298 L. usitatissimum v1.0 123429180 ubiquitin fusion degradation 1 3 5275 Viridiplantae
Gorai.008G032200.1 G. raimondii v2.1 123429180 ubiquitin fusion degradation 1 3 5275 Viridiplantae
55902 M. pusilla CCMP1545 v3.0 123429180 ubiquitin fusion degradation 1 1 5275 Viridiplantae
14771 C. subellipsoidea C-169 v2.0 123429180 ubiquitin fusion degradation 1 1 5275 Viridiplantae
34773 O. lucimarinus v2.0 123429180 ubiquitin fusion degradation 1 1 5275 Viridiplantae
Thecc1EG041807t1 T. cacao v1.1 123429180 ubiquitin fusion degradation 1 5 5275 Viridiplantae
Thecc1EG012308t1 T. cacao v1.1 123429180 ubiquitin fusion degradation 1 5 5275 Viridiplantae
Migut.H00388.1.p M. guttatus v2.0 123429180 ubiquitin fusion degradation 1 6 5275 Viridiplantae
Glyma.15G036700.1.p G. max Wm82.a2.v1 123429180 ubiquitin fusion degradation 1 4 5275 Viridiplantae
Glyma.05G238500.1.p G. max Wm82.a2.v1 123429180 ubiquitin fusion degradation 1 4 5275 Viridiplantae
Brara.D01741.1.p B. rapa FPsc v1.3 123429180 ubiquitin fusion degradation 1 3 5275 Viridiplantae
Brara.I04654.1.p B. rapa FPsc v1.3 123429180 ubiquitin fusion degradation 1 3 5275 Viridiplantae
Bostr.27991s0169.1.p B. stricta v1.2 123429180 ubiquitin fusion degradation 1 2 5275 Viridiplantae
Medtr8g105250.1 M. truncatula Mt4.0v1 123429180 ubiquitin fusion degradation 1 4 5275 Viridiplantae
Medtr4g064330.1 M. truncatula Mt4.0v1 123429180 ubiquitin fusion degradation 1 4 5275 Viridiplantae
Medtr4g064260.1 M. truncatula Mt4.0v1 123429180 ubiquitin fusion degradation 1 4 5275 Viridiplantae
Medtr4g064300.1 M. truncatula Mt4.0v1 123429180 ubiquitin fusion degradation 1 4 5275 Viridiplantae
SapurV1A.0091s0160.1.p S. purpurea v1.0 123429180 ubiquitin fusion degradation 1 4 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00012.218 A. trichopoda v1.0 123429180 ubiquitin fusion degradation 1 1 5275 Viridiplantae
Traes_2BL_3A05F071C.1 T. aestivum v2.2 123429180 ubiquitin fusion degradation 1 5 5275 Viridiplantae
Traes_2DL_327BD39EA.1 T. aestivum v2.2 123429180 ubiquitin fusion degradation 1 5 5275 Viridiplantae
Traes_6DS_379A1EE8B.1 T. aestivum v2.2 123429180 ubiquitin fusion degradation 1 5 5275 Viridiplantae
Traes_2AL_A296CFC08.1 T. aestivum v2.2 123429180 ubiquitin fusion degradation 1 5 5275 Viridiplantae