Gene : AT2G29070 A. thaliana TAIR10
Defline:  (1 of 3) K14016 - ubiquitin fusion degradation protein 1 (UFD1) Genomic Order:  2196
Name:  ? AT2G29070 Secondary Identifier:  ? PAC:19639301
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G29070 0.5kb upstream 0.5kb upstream 2745 true Chr2: 12486774-12489518 Arabidopsis thaliana
AT2G29070 0.5kb upstream 0.5kb upstream 500 false Chr2: 12486774-12487273 Arabidopsis thaliana
AT2G29070 0.5kb downstream 0.5kb downstream 2745 true Chr2: 12487274-12490018 Arabidopsis thaliana
AT2G29070 0.5kb downstream 0.5kb downstream 500 false Chr2: 12489519-12490018 Arabidopsis thaliana
AT2G29070 1.0kb upstream 1.0kb upstream 3245 true Chr2: 12486274-12489518 Arabidopsis thaliana
AT2G29070 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12486274-12487273 Arabidopsis thaliana
AT2G29070 1.0kb downstream 1.0kb downstream 3245 true Chr2: 12487274-12490518 Arabidopsis thaliana
AT2G29070 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12489519-12490518 Arabidopsis thaliana
AT2G29070 2.0kb upstream 2.0kb upstream 4245 true Chr2: 12485274-12489518 Arabidopsis thaliana
AT2G29070 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12485274-12487273 Arabidopsis thaliana
AT2G29070 2.0kb downstream 2.0kb downstream 4245 true Chr2: 12487274-12491518 Arabidopsis thaliana
AT2G29070 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12489519-12491518 Arabidopsis thaliana
AT2G29070 5.0kb upstream 5.0kb upstream 7245 true Chr2: 12482274-12489518 Arabidopsis thaliana
AT2G29070 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12482274-12487273 Arabidopsis thaliana
AT2G29070 5.0kb downstream 5.0kb downstream 7245 true Chr2: 12487274-12494518 Arabidopsis thaliana
AT2G29070 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12489519-12494518 Arabidopsis thaliana
AT2G29070 10.0kb upstream 10.0kb upstream 12245 true Chr2: 12477274-12489518 Arabidopsis thaliana
AT2G29070 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12477274-12487273 Arabidopsis thaliana
AT2G29070 10.0kb downstream 10.0kb downstream 12245 true Chr2: 12487274-12499518 Arabidopsis thaliana
AT2G29070 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12489519-12499518 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360350 5261 Brassicaceae View MSA
123841254 5264 Brassicales-Malvales View MSA
124343280 5266 SBM View MSA
124245019 5268 Malvidae View MSA
124037183 5270 Rosid View MSA
123742112 5271 Pentapetalae View MSA
122770203 5272 Eudicot View MSA
122047756 5273 Angiosperm View MSA
123429180 5275 Viridiplantae View MSA
121346012 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.76        
cufflinks 3.545        
cufflinks 2.493       Low
cufflinks 4.011       High
cufflinks 2.72        
cufflinks 3.164        

0 Strain