Gene : Cagra.2848s0018 C. grandiflora v1.1
Defline:  (1 of 7) PTHR24093:SF355 - ATPASE 1, PLASMA MEMBRANE-TYPE-RELATED Genomic Order:  18
Name:  ? Cagra.2848s0018 Secondary Identifier:  ? PAC:28919672
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2848s0018 0.5kb upstream 0.5kb upstream 6054 true Scaffold2848: 65841-71894 Capsella grandiflora
Cagra.2848s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold2848: 71395-71894 Capsella grandiflora
Cagra.2848s0018 0.5kb downstream 0.5kb downstream 6054 true Scaffold2848: 65341-71394 Capsella grandiflora
Cagra.2848s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold2848: 65341-65840 Capsella grandiflora
Cagra.2848s0018 1.0kb upstream 1.0kb upstream 6554 true Scaffold2848: 65841-72394 Capsella grandiflora
Cagra.2848s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold2848: 71395-72394 Capsella grandiflora
Cagra.2848s0018 1.0kb downstream 1.0kb downstream 6554 true Scaffold2848: 64841-71394 Capsella grandiflora
Cagra.2848s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold2848: 64841-65840 Capsella grandiflora
Cagra.2848s0018 2.0kb upstream 2.0kb upstream 7554 true Scaffold2848: 65841-73394 Capsella grandiflora
Cagra.2848s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold2848: 71395-73394 Capsella grandiflora
Cagra.2848s0018 2.0kb downstream 2.0kb downstream 7554 true Scaffold2848: 63841-71394 Capsella grandiflora
Cagra.2848s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold2848: 63841-65840 Capsella grandiflora
Cagra.2848s0018 5.0kb upstream 5.0kb upstream 10554 true Scaffold2848: 65841-76394 Capsella grandiflora
Cagra.2848s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold2848: 71395-76394 Capsella grandiflora
Cagra.2848s0018 5.0kb downstream 5.0kb downstream 10554 true Scaffold2848: 60841-71394 Capsella grandiflora
Cagra.2848s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold2848: 60841-65840 Capsella grandiflora
Cagra.2848s0018 10.0kb upstream 10.0kb upstream 15554 true Scaffold2848: 65841-81394 Capsella grandiflora
Cagra.2848s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold2848: 71395-81394 Capsella grandiflora
Cagra.2848s0018 10.0kb downstream 10.0kb downstream 15554 true Scaffold2848: 55841-71394 Capsella grandiflora
Cagra.2848s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold2848: 55841-65840 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343706 5261 Brassicaceae View MSA
123783821 5264 Brassicales-Malvales View MSA
124282034 5266 SBM View MSA
124136696 5268 Malvidae View MSA
123864514 5270 Rosid View MSA
123751017 5271 Pentapetalae View MSA
122796712 5272 Eudicot View MSA
122050656 5273 Angiosperm View MSA
121349531 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain