Gene : Cagra.2848s0036 C. grandiflora v1.1
Defline:  (1 of 10) PTHR31062:SF20 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 14-RELATED Genomic Order:  36
Name:  ? Cagra.2848s0036 Secondary Identifier:  ? PAC:28919618
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2848s0036 0.5kb upstream 0.5kb upstream 1629 true Scaffold2848: 141039-142667 Capsella grandiflora
Cagra.2848s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold2848: 142168-142667 Capsella grandiflora
Cagra.2848s0036 0.5kb downstream 0.5kb downstream 1629 true Scaffold2848: 140539-142167 Capsella grandiflora
Cagra.2848s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold2848: 140539-141038 Capsella grandiflora
Cagra.2848s0036 1.0kb upstream 1.0kb upstream 2129 true Scaffold2848: 141039-143167 Capsella grandiflora
Cagra.2848s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold2848: 142168-143167 Capsella grandiflora
Cagra.2848s0036 1.0kb downstream 1.0kb downstream 2129 true Scaffold2848: 140039-142167 Capsella grandiflora
Cagra.2848s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold2848: 140039-141038 Capsella grandiflora
Cagra.2848s0036 2.0kb upstream 2.0kb upstream 3129 true Scaffold2848: 141039-144167 Capsella grandiflora
Cagra.2848s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold2848: 142168-144167 Capsella grandiflora
Cagra.2848s0036 2.0kb downstream 2.0kb downstream 3129 true Scaffold2848: 139039-142167 Capsella grandiflora
Cagra.2848s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold2848: 139039-141038 Capsella grandiflora
Cagra.2848s0036 5.0kb upstream 5.0kb upstream 6129 true Scaffold2848: 141039-147167 Capsella grandiflora
Cagra.2848s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold2848: 142168-147167 Capsella grandiflora
Cagra.2848s0036 5.0kb downstream 5.0kb downstream 6129 true Scaffold2848: 136039-142167 Capsella grandiflora
Cagra.2848s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold2848: 136039-141038 Capsella grandiflora
Cagra.2848s0036 10.0kb upstream 10.0kb upstream 11129 true Scaffold2848: 141039-152167 Capsella grandiflora
Cagra.2848s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold2848: 142168-152167 Capsella grandiflora
Cagra.2848s0036 10.0kb downstream 10.0kb downstream 11129 true Scaffold2848: 131039-142167 Capsella grandiflora
Cagra.2848s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold2848: 131039-141038 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363023 5261 Brassicaceae View MSA
123840793 5264 Brassicales-Malvales View MSA
124350443 5266 SBM View MSA
124251513 5268 Malvidae View MSA
124074397 5270 Rosid View MSA
123749278 5271 Pentapetalae View MSA
122796709 5272 Eudicot View MSA
122046395 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain