Gene : Cagra.2848s0085 C. grandiflora v1.1
Defline:  (1 of 4) PTHR11387 - CYTOCHROME C OXIDASE POLYPEPTIDE VIB Genomic Order:  85
Name:  ? Cagra.2848s0085 Secondary Identifier:  ? PAC:28919625
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2848s0085 0.5kb upstream 0.5kb upstream 1633 true Scaffold2848: 315773-317405 Capsella grandiflora
Cagra.2848s0085 0.5kb upstream 0.5kb upstream 500 false Scaffold2848: 315773-316272 Capsella grandiflora
Cagra.2848s0085 0.5kb downstream 0.5kb downstream 1633 true Scaffold2848: 316273-317905 Capsella grandiflora
Cagra.2848s0085 0.5kb downstream 0.5kb downstream 500 false Scaffold2848: 317406-317905 Capsella grandiflora
Cagra.2848s0085 1.0kb upstream 1.0kb upstream 2133 true Scaffold2848: 315273-317405 Capsella grandiflora
Cagra.2848s0085 1.0kb upstream 1.0kb upstream 1000 false Scaffold2848: 315273-316272 Capsella grandiflora
Cagra.2848s0085 1.0kb downstream 1.0kb downstream 2133 true Scaffold2848: 316273-318405 Capsella grandiflora
Cagra.2848s0085 1.0kb downstream 1.0kb downstream 1000 false Scaffold2848: 317406-318405 Capsella grandiflora
Cagra.2848s0085 2.0kb upstream 2.0kb upstream 3133 true Scaffold2848: 314273-317405 Capsella grandiflora
Cagra.2848s0085 2.0kb upstream 2.0kb upstream 2000 false Scaffold2848: 314273-316272 Capsella grandiflora
Cagra.2848s0085 2.0kb downstream 2.0kb downstream 3133 true Scaffold2848: 316273-319405 Capsella grandiflora
Cagra.2848s0085 2.0kb downstream 2.0kb downstream 2000 false Scaffold2848: 317406-319405 Capsella grandiflora
Cagra.2848s0085 5.0kb upstream 5.0kb upstream 6133 true Scaffold2848: 311273-317405 Capsella grandiflora
Cagra.2848s0085 5.0kb upstream 5.0kb upstream 5000 false Scaffold2848: 311273-316272 Capsella grandiflora
Cagra.2848s0085 5.0kb downstream 5.0kb downstream 6133 true Scaffold2848: 316273-322405 Capsella grandiflora
Cagra.2848s0085 5.0kb downstream 5.0kb downstream 5000 false Scaffold2848: 317406-322405 Capsella grandiflora
Cagra.2848s0085 10.0kb upstream 10.0kb upstream 11133 true Scaffold2848: 306273-317405 Capsella grandiflora
Cagra.2848s0085 10.0kb upstream 10.0kb upstream 10000 false Scaffold2848: 306273-316272 Capsella grandiflora
Cagra.2848s0085 10.0kb downstream 10.0kb downstream 11133 true Scaffold2848: 316273-327405 Capsella grandiflora
Cagra.2848s0085 10.0kb downstream 10.0kb downstream 10000 false Scaffold2848: 317406-327405 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368298 5261 Brassicaceae View MSA
123831747 5264 Brassicales-Malvales View MSA
124336525 5266 SBM View MSA
124239155 5268 Malvidae View MSA
124064279 5270 Rosid View MSA
123737563 5271 Pentapetalae View MSA
122793935 5272 Eudicot View MSA
122042745 5273 Angiosperm View MSA
121350001 5274 Embryophyte View MSA
123426527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain