Gene : Cagra.2793s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24093:SF272 - CADMIUM/ZINC-TRANSPORTING ATPASE HMA1, CHLOROPLASTIC-RELATED Genomic Order:  1
Name:  ? Cagra.2793s0001 Secondary Identifier:  ? PAC:28911657
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2793s0001 0.5kb upstream 0.5kb upstream 3691 true Scaffold2793: 710-4400 Capsella grandiflora
Cagra.2793s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2793: 3901-4400 Capsella grandiflora
Cagra.2793s0001 0.5kb downstream 0.5kb downstream 3691 true Scaffold2793: 210-3900 Capsella grandiflora
Cagra.2793s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2793: 210-709 Capsella grandiflora
Cagra.2793s0001 1.0kb upstream 1.0kb upstream 4191 true Scaffold2793: 710-4900 Capsella grandiflora
Cagra.2793s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2793: 3901-4900 Capsella grandiflora
Cagra.2793s0001 1.0kb downstream 1.0kb downstream 3900 true Scaffold2793: 1-3900 Capsella grandiflora
Cagra.2793s0001 1.0kb downstream 1.0kb downstream 709 false Scaffold2793: 1-709 Capsella grandiflora
Cagra.2793s0001 2.0kb upstream 2.0kb upstream 5191 true Scaffold2793: 710-5900 Capsella grandiflora
Cagra.2793s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2793: 3901-5900 Capsella grandiflora
Cagra.2793s0001 2.0kb downstream 2.0kb downstream 3900 true Scaffold2793: 1-3900 Capsella grandiflora
Cagra.2793s0001 2.0kb downstream 2.0kb downstream 709 false Scaffold2793: 1-709 Capsella grandiflora
Cagra.2793s0001 5.0kb upstream 5.0kb upstream 8191 true Scaffold2793: 710-8900 Capsella grandiflora
Cagra.2793s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold2793: 3901-8900 Capsella grandiflora
Cagra.2793s0001 5.0kb downstream 5.0kb downstream 3900 true Scaffold2793: 1-3900 Capsella grandiflora
Cagra.2793s0001 5.0kb downstream 5.0kb downstream 709 false Scaffold2793: 1-709 Capsella grandiflora
Cagra.2793s0001 10.0kb upstream 10.0kb upstream 13191 true Scaffold2793: 710-13900 Capsella grandiflora
Cagra.2793s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold2793: 3901-13900 Capsella grandiflora
Cagra.2793s0001 10.0kb downstream 10.0kb downstream 3900 true Scaffold2793: 1-3900 Capsella grandiflora
Cagra.2793s0001 10.0kb downstream 10.0kb downstream 709 false Scaffold2793: 1-709 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371538 5261 Brassicaceae View MSA
123800182 5264 Brassicales-Malvales View MSA
124297627 5266 SBM View MSA
124244823 5268 Malvidae View MSA
124064324 5270 Rosid View MSA
123739287 5271 Pentapetalae View MSA
122793193 5272 Eudicot View MSA
122049253 5273 Angiosperm View MSA
121346683 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain