Gene : Cagra.2675s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10366:SF244 - CINNAMYL-ALCOHOL DEHYDROGENASE-RELATED Genomic Order:  11
Name:  ? Cagra.2675s0011 Secondary Identifier:  ? PAC:28906682
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-361 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2675s0011 0.5kb upstream 0.5kb upstream 1702 true Scaffold2675: 30419-32120 Capsella grandiflora
Cagra.2675s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold2675: 30419-30918 Capsella grandiflora
Cagra.2675s0011 0.5kb downstream 0.5kb downstream 1702 true Scaffold2675: 30919-32620 Capsella grandiflora
Cagra.2675s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold2675: 32121-32620 Capsella grandiflora
Cagra.2675s0011 1.0kb upstream 1.0kb upstream 2202 true Scaffold2675: 29919-32120 Capsella grandiflora
Cagra.2675s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold2675: 29919-30918 Capsella grandiflora
Cagra.2675s0011 1.0kb downstream 1.0kb downstream 2202 true Scaffold2675: 30919-33120 Capsella grandiflora
Cagra.2675s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold2675: 32121-33120 Capsella grandiflora
Cagra.2675s0011 2.0kb upstream 2.0kb upstream 3202 true Scaffold2675: 28919-32120 Capsella grandiflora
Cagra.2675s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold2675: 28919-30918 Capsella grandiflora
Cagra.2675s0011 2.0kb downstream 2.0kb downstream 3202 true Scaffold2675: 30919-34120 Capsella grandiflora
Cagra.2675s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold2675: 32121-34120 Capsella grandiflora
Cagra.2675s0011 5.0kb upstream 5.0kb upstream 6202 true Scaffold2675: 25919-32120 Capsella grandiflora
Cagra.2675s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold2675: 25919-30918 Capsella grandiflora
Cagra.2675s0011 5.0kb downstream 5.0kb downstream 6202 true Scaffold2675: 30919-37120 Capsella grandiflora
Cagra.2675s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold2675: 32121-37120 Capsella grandiflora
Cagra.2675s0011 10.0kb upstream 10.0kb upstream 11202 true Scaffold2675: 20919-32120 Capsella grandiflora
Cagra.2675s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold2675: 20919-30918 Capsella grandiflora
Cagra.2675s0011 10.0kb downstream 10.0kb downstream 8884 true Scaffold2675: 30919-39802 Capsella grandiflora
Cagra.2675s0011 10.0kb downstream 10.0kb downstream 7682 false Scaffold2675: 32121-39802 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365750 5261 Brassicaceae View MSA
123837668 5264 Brassicales-Malvales View MSA
124343860 5266 SBM View MSA
124238633 5268 Malvidae View MSA
124067100 5270 Rosid View MSA
123752094 5271 Pentapetalae View MSA
122797549 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain