Gene : Cagra.2694s0002 C. grandiflora v1.1
Defline:  (1 of 1) KOG1973 - Chromatin remodeling protein, contains PHD Zn-finger Genomic Order:  2
Name:  ? Cagra.2694s0002 Secondary Identifier:  ? PAC:28904678
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2694s0002 0.5kb upstream 0.5kb upstream 3072 true Scaffold2694: 1995-5066 Capsella grandiflora
Cagra.2694s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold2694: 1995-2494 Capsella grandiflora
Cagra.2694s0002 0.5kb downstream 0.5kb downstream 3072 true Scaffold2694: 2495-5566 Capsella grandiflora
Cagra.2694s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold2694: 5067-5566 Capsella grandiflora
Cagra.2694s0002 1.0kb upstream 1.0kb upstream 3572 true Scaffold2694: 1495-5066 Capsella grandiflora
Cagra.2694s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold2694: 1495-2494 Capsella grandiflora
Cagra.2694s0002 1.0kb downstream 1.0kb downstream 3572 true Scaffold2694: 2495-6066 Capsella grandiflora
Cagra.2694s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold2694: 5067-6066 Capsella grandiflora
Cagra.2694s0002 2.0kb upstream 2.0kb upstream 4572 true Scaffold2694: 495-5066 Capsella grandiflora
Cagra.2694s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold2694: 495-2494 Capsella grandiflora
Cagra.2694s0002 2.0kb downstream 2.0kb downstream 4572 true Scaffold2694: 2495-7066 Capsella grandiflora
Cagra.2694s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold2694: 5067-7066 Capsella grandiflora
Cagra.2694s0002 5.0kb upstream 5.0kb upstream 5066 true Scaffold2694: 1-5066 Capsella grandiflora
Cagra.2694s0002 5.0kb upstream 5.0kb upstream 2494 false Scaffold2694: 1-2494 Capsella grandiflora
Cagra.2694s0002 5.0kb downstream 5.0kb downstream 7572 true Scaffold2694: 2495-10066 Capsella grandiflora
Cagra.2694s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold2694: 5067-10066 Capsella grandiflora
Cagra.2694s0002 10.0kb upstream 10.0kb upstream 5066 true Scaffold2694: 1-5066 Capsella grandiflora
Cagra.2694s0002 10.0kb upstream 10.0kb upstream 2494 false Scaffold2694: 1-2494 Capsella grandiflora
Cagra.2694s0002 10.0kb downstream 10.0kb downstream 12282 true Scaffold2694: 2495-14776 Capsella grandiflora
Cagra.2694s0002 10.0kb downstream 10.0kb downstream 9710 false Scaffold2694: 5067-14776 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365419 5261 Brassicaceae View MSA
123833162 5264 Brassicales-Malvales View MSA
124344544 5266 SBM View MSA
124248005 5268 Malvidae View MSA
124062837 5270 Rosid View MSA
123737861 5271 Pentapetalae View MSA
122787815 5272 Eudicot View MSA
122043468 5273 Angiosperm View MSA
121347114 5274 Embryophyte View MSA
123426604 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain