Gene : Cagra.2761s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF106 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED Genomic Order:  4
Name:  ? Cagra.2761s0004 Secondary Identifier:  ? PAC:28915088
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5980 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2761s0004 0.5kb upstream 0.5kb upstream 2780 true Scaffold2761: 11797-14576 Capsella grandiflora
Cagra.2761s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold2761: 14077-14576 Capsella grandiflora
Cagra.2761s0004 0.5kb downstream 0.5kb downstream 2780 true Scaffold2761: 11297-14076 Capsella grandiflora
Cagra.2761s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold2761: 11297-11796 Capsella grandiflora
Cagra.2761s0004 1.0kb upstream 1.0kb upstream 3280 true Scaffold2761: 11797-15076 Capsella grandiflora
Cagra.2761s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold2761: 14077-15076 Capsella grandiflora
Cagra.2761s0004 1.0kb downstream 1.0kb downstream 3280 true Scaffold2761: 10797-14076 Capsella grandiflora
Cagra.2761s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold2761: 10797-11796 Capsella grandiflora
Cagra.2761s0004 2.0kb upstream 2.0kb upstream 4280 true Scaffold2761: 11797-16076 Capsella grandiflora
Cagra.2761s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold2761: 14077-16076 Capsella grandiflora
Cagra.2761s0004 2.0kb downstream 2.0kb downstream 4280 true Scaffold2761: 9797-14076 Capsella grandiflora
Cagra.2761s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold2761: 9797-11796 Capsella grandiflora
Cagra.2761s0004 5.0kb upstream 5.0kb upstream 7280 true Scaffold2761: 11797-19076 Capsella grandiflora
Cagra.2761s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold2761: 14077-19076 Capsella grandiflora
Cagra.2761s0004 5.0kb downstream 5.0kb downstream 7280 true Scaffold2761: 6797-14076 Capsella grandiflora
Cagra.2761s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold2761: 6797-11796 Capsella grandiflora
Cagra.2761s0004 10.0kb upstream 10.0kb upstream 12280 true Scaffold2761: 11797-24076 Capsella grandiflora
Cagra.2761s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold2761: 14077-24076 Capsella grandiflora
Cagra.2761s0004 10.0kb downstream 10.0kb downstream 12280 true Scaffold2761: 1797-14076 Capsella grandiflora
Cagra.2761s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold2761: 1797-11796 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333383 5261 Brassicaceae Singleton cluster - no MSA
123838167 5264 Brassicales-Malvales View MSA
124346203 5266 SBM View MSA
124252793 5268 Malvidae View MSA
124072198 5270 Rosid View MSA
123751032 5271 Pentapetalae View MSA
122797278 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain