Gene : Cagra.2636s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12231:SF111 - MATRIX-REMODELING-ASSOCIATED PROTEIN 8 Genomic Order:  6
Name:  ? Cagra.2636s0006 Secondary Identifier:  ? PAC:28904980
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2636s0006 0.5kb upstream 0.5kb upstream 1946 true Scaffold2636: 14448-16393 Capsella grandiflora
Cagra.2636s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold2636: 14448-14947 Capsella grandiflora
Cagra.2636s0006 0.5kb downstream 0.5kb downstream 1946 true Scaffold2636: 14948-16893 Capsella grandiflora
Cagra.2636s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold2636: 16394-16893 Capsella grandiflora
Cagra.2636s0006 1.0kb upstream 1.0kb upstream 2446 true Scaffold2636: 13948-16393 Capsella grandiflora
Cagra.2636s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold2636: 13948-14947 Capsella grandiflora
Cagra.2636s0006 1.0kb downstream 1.0kb downstream 2446 true Scaffold2636: 14948-17393 Capsella grandiflora
Cagra.2636s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold2636: 16394-17393 Capsella grandiflora
Cagra.2636s0006 2.0kb upstream 2.0kb upstream 3446 true Scaffold2636: 12948-16393 Capsella grandiflora
Cagra.2636s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold2636: 12948-14947 Capsella grandiflora
Cagra.2636s0006 2.0kb downstream 2.0kb downstream 3446 true Scaffold2636: 14948-18393 Capsella grandiflora
Cagra.2636s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold2636: 16394-18393 Capsella grandiflora
Cagra.2636s0006 5.0kb upstream 5.0kb upstream 6446 true Scaffold2636: 9948-16393 Capsella grandiflora
Cagra.2636s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold2636: 9948-14947 Capsella grandiflora
Cagra.2636s0006 5.0kb downstream 5.0kb downstream 6446 true Scaffold2636: 14948-21393 Capsella grandiflora
Cagra.2636s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold2636: 16394-21393 Capsella grandiflora
Cagra.2636s0006 10.0kb upstream 10.0kb upstream 11446 true Scaffold2636: 4948-16393 Capsella grandiflora
Cagra.2636s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold2636: 4948-14947 Capsella grandiflora
Cagra.2636s0006 10.0kb downstream 10.0kb downstream 11446 true Scaffold2636: 14948-26393 Capsella grandiflora
Cagra.2636s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold2636: 16394-26393 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374279 5261 Brassicaceae View MSA
123827476 5264 Brassicales-Malvales View MSA
124340637 5266 SBM View MSA
124240940 5268 Malvidae View MSA
124067502 5270 Rosid View MSA
123738309 5271 Pentapetalae View MSA
122792566 5272 Eudicot View MSA
122046652 5273 Angiosperm View MSA
121347654 5274 Embryophyte View MSA
123380591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain