Gene : Cagra.2662s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24326:SF187 - HOMEODOMAIN PROTEIN-RELATED Genomic Order:  4
Name:  ? Cagra.2662s0004 Secondary Identifier:  ? PAC:28900688
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2662s0004 0.5kb upstream 0.5kb upstream 2544 true Scaffold2662: 7357-9900 Capsella grandiflora
Cagra.2662s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold2662: 7357-7856 Capsella grandiflora
Cagra.2662s0004 0.5kb downstream 0.5kb downstream 2544 true Scaffold2662: 7857-10400 Capsella grandiflora
Cagra.2662s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold2662: 9901-10400 Capsella grandiflora
Cagra.2662s0004 1.0kb upstream 1.0kb upstream 3044 true Scaffold2662: 6857-9900 Capsella grandiflora
Cagra.2662s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold2662: 6857-7856 Capsella grandiflora
Cagra.2662s0004 1.0kb downstream 1.0kb downstream 3044 true Scaffold2662: 7857-10900 Capsella grandiflora
Cagra.2662s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold2662: 9901-10900 Capsella grandiflora
Cagra.2662s0004 2.0kb upstream 2.0kb upstream 4044 true Scaffold2662: 5857-9900 Capsella grandiflora
Cagra.2662s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold2662: 5857-7856 Capsella grandiflora
Cagra.2662s0004 2.0kb downstream 2.0kb downstream 4044 true Scaffold2662: 7857-11900 Capsella grandiflora
Cagra.2662s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold2662: 9901-11900 Capsella grandiflora
Cagra.2662s0004 5.0kb upstream 5.0kb upstream 7044 true Scaffold2662: 2857-9900 Capsella grandiflora
Cagra.2662s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold2662: 2857-7856 Capsella grandiflora
Cagra.2662s0004 5.0kb downstream 5.0kb downstream 7044 true Scaffold2662: 7857-14900 Capsella grandiflora
Cagra.2662s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold2662: 9901-14900 Capsella grandiflora
Cagra.2662s0004 10.0kb upstream 10.0kb upstream 9900 true Scaffold2662: 1-9900 Capsella grandiflora
Cagra.2662s0004 10.0kb upstream 10.0kb upstream 7856 false Scaffold2662: 1-7856 Capsella grandiflora
Cagra.2662s0004 10.0kb downstream 10.0kb downstream 12044 true Scaffold2662: 7857-19900 Capsella grandiflora
Cagra.2662s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold2662: 9901-19900 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502581 5273 Angiosperm View MSA
122343098 5261 Brassicaceae View MSA
123783397 5264 Brassicales-Malvales View MSA
124281632 5266 SBM View MSA
124136356 5268 Malvidae View MSA
123864230 5270 Rosid View MSA
123449563 5271 Pentapetalae View MSA
122485095 5272 Eudicot View MSA
120775891 5274 Embryophyte View MSA
122818182 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain