Gene : Cagra.2552s0025 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19847 - WD40 REPEAT PROTEIN Genomic Order:  25
Name:  ? Cagra.2552s0025 Secondary Identifier:  ? PAC:28895076
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2552s0025 0.5kb upstream 0.5kb upstream 4058 true Scaffold2552: 77433-81490 Capsella grandiflora
Cagra.2552s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold2552: 77433-77932 Capsella grandiflora
Cagra.2552s0025 0.5kb downstream 0.5kb downstream 4058 true Scaffold2552: 77933-81990 Capsella grandiflora
Cagra.2552s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold2552: 81491-81990 Capsella grandiflora
Cagra.2552s0025 1.0kb upstream 1.0kb upstream 4558 true Scaffold2552: 76933-81490 Capsella grandiflora
Cagra.2552s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold2552: 76933-77932 Capsella grandiflora
Cagra.2552s0025 1.0kb downstream 1.0kb downstream 4558 true Scaffold2552: 77933-82490 Capsella grandiflora
Cagra.2552s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold2552: 81491-82490 Capsella grandiflora
Cagra.2552s0025 2.0kb upstream 2.0kb upstream 5558 true Scaffold2552: 75933-81490 Capsella grandiflora
Cagra.2552s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold2552: 75933-77932 Capsella grandiflora
Cagra.2552s0025 2.0kb downstream 2.0kb downstream 5558 true Scaffold2552: 77933-83490 Capsella grandiflora
Cagra.2552s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold2552: 81491-83490 Capsella grandiflora
Cagra.2552s0025 5.0kb upstream 5.0kb upstream 8558 true Scaffold2552: 72933-81490 Capsella grandiflora
Cagra.2552s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold2552: 72933-77932 Capsella grandiflora
Cagra.2552s0025 5.0kb downstream 5.0kb downstream 8558 true Scaffold2552: 77933-86490 Capsella grandiflora
Cagra.2552s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold2552: 81491-86490 Capsella grandiflora
Cagra.2552s0025 10.0kb upstream 10.0kb upstream 13558 true Scaffold2552: 67933-81490 Capsella grandiflora
Cagra.2552s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold2552: 67933-77932 Capsella grandiflora
Cagra.2552s0025 10.0kb downstream 10.0kb downstream 13558 true Scaffold2552: 77933-91490 Capsella grandiflora
Cagra.2552s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold2552: 81491-91490 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372276 5261 Brassicaceae View MSA
123828977 5264 Brassicales-Malvales View MSA
124341337 5266 SBM View MSA
124251731 5268 Malvidae View MSA
124065420 5270 Rosid View MSA
123742519 5271 Pentapetalae View MSA
122785957 5272 Eudicot View MSA
122047753 5273 Angiosperm View MSA
121344393 5274 Embryophyte View MSA
123427446 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain