Gene : Cagra.2552s0028 C. grandiflora v1.1

Defline:  (1 of 1) PTHR13068:SF24 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR-LIKE PROTEIN BELAYA SMERT Genomic Order:  28
Name:  ? Cagra.2552s0028 Secondary Identifier:  ? PAC:28895071

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2552s0028 0.5kb upstream 0.5kb upstream 2649 true Scaffold2552: 89083-91731 Capsella grandiflora
Cagra.2552s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold2552: 91232-91731 Capsella grandiflora
Cagra.2552s0028 0.5kb downstream 0.5kb downstream 2649 true Scaffold2552: 88583-91231 Capsella grandiflora
Cagra.2552s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold2552: 88583-89082 Capsella grandiflora
Cagra.2552s0028 1.0kb upstream 1.0kb upstream 3149 true Scaffold2552: 89083-92231 Capsella grandiflora
Cagra.2552s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold2552: 91232-92231 Capsella grandiflora
Cagra.2552s0028 1.0kb downstream 1.0kb downstream 3149 true Scaffold2552: 88083-91231 Capsella grandiflora
Cagra.2552s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold2552: 88083-89082 Capsella grandiflora
Cagra.2552s0028 2.0kb upstream 2.0kb upstream 4149 true Scaffold2552: 89083-93231 Capsella grandiflora
Cagra.2552s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold2552: 91232-93231 Capsella grandiflora
Cagra.2552s0028 2.0kb downstream 2.0kb downstream 4149 true Scaffold2552: 87083-91231 Capsella grandiflora
Cagra.2552s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold2552: 87083-89082 Capsella grandiflora
Cagra.2552s0028 5.0kb upstream 5.0kb upstream 6989 true Scaffold2552: 89083-96071 Capsella grandiflora
Cagra.2552s0028 5.0kb upstream 5.0kb upstream 4840 false Scaffold2552: 91232-96071 Capsella grandiflora
Cagra.2552s0028 5.0kb downstream 5.0kb downstream 7149 true Scaffold2552: 84083-91231 Capsella grandiflora
Cagra.2552s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold2552: 84083-89082 Capsella grandiflora
Cagra.2552s0028 10.0kb upstream 10.0kb upstream 6989 true Scaffold2552: 89083-96071 Capsella grandiflora
Cagra.2552s0028 10.0kb upstream 10.0kb upstream 4840 false Scaffold2552: 91232-96071 Capsella grandiflora
Cagra.2552s0028 10.0kb downstream 10.0kb downstream 12149 true Scaffold2552: 79083-91231 Capsella grandiflora
Cagra.2552s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold2552: 79083-89082 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040971 5273 Angiosperm View MSA
122374547 5261 Brassicaceae View MSA
123831541 5264 Brassicales-Malvales View MSA
124339709 5266 SBM View MSA
124241412 5268 Malvidae View MSA
124061802 5270 Rosid View MSA
123747028 5271 Pentapetalae View MSA
122792069 5272 Eudicot View MSA
121347791 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain