Gene : Cagra.2566s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12829:SF2 - N6-ADENOSINE-METHYLTRANSFERASE 70 KDA SUBUNIT Genomic Order:  5
Name:  ? Cagra.2566s0005 Secondary Identifier:  ? PAC:28906557
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2566s0005 0.5kb upstream 0.5kb upstream 4035 true Scaffold2566: 13256-17290 Capsella grandiflora
Cagra.2566s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2566: 13256-13755 Capsella grandiflora
Cagra.2566s0005 0.5kb downstream 0.5kb downstream 4035 true Scaffold2566: 13756-17790 Capsella grandiflora
Cagra.2566s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2566: 17291-17790 Capsella grandiflora
Cagra.2566s0005 1.0kb upstream 1.0kb upstream 4535 true Scaffold2566: 12756-17290 Capsella grandiflora
Cagra.2566s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2566: 12756-13755 Capsella grandiflora
Cagra.2566s0005 1.0kb downstream 1.0kb downstream 4535 true Scaffold2566: 13756-18290 Capsella grandiflora
Cagra.2566s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2566: 17291-18290 Capsella grandiflora
Cagra.2566s0005 2.0kb upstream 2.0kb upstream 5535 true Scaffold2566: 11756-17290 Capsella grandiflora
Cagra.2566s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2566: 11756-13755 Capsella grandiflora
Cagra.2566s0005 2.0kb downstream 2.0kb downstream 5535 true Scaffold2566: 13756-19290 Capsella grandiflora
Cagra.2566s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2566: 17291-19290 Capsella grandiflora
Cagra.2566s0005 5.0kb upstream 5.0kb upstream 8535 true Scaffold2566: 8756-17290 Capsella grandiflora
Cagra.2566s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2566: 8756-13755 Capsella grandiflora
Cagra.2566s0005 5.0kb downstream 5.0kb downstream 8535 true Scaffold2566: 13756-22290 Capsella grandiflora
Cagra.2566s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2566: 17291-22290 Capsella grandiflora
Cagra.2566s0005 10.0kb upstream 10.0kb upstream 13535 true Scaffold2566: 3756-17290 Capsella grandiflora
Cagra.2566s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold2566: 3756-13755 Capsella grandiflora
Cagra.2566s0005 10.0kb downstream 10.0kb downstream 13535 true Scaffold2566: 13756-27290 Capsella grandiflora
Cagra.2566s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold2566: 17291-27290 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370590 5261 Brassicaceae View MSA
123832272 5264 Brassicales-Malvales View MSA
124339174 5266 SBM View MSA
124238460 5268 Malvidae View MSA
124068237 5270 Rosid View MSA
123739391 5271 Pentapetalae View MSA
122790080 5272 Eudicot View MSA
122047646 5273 Angiosperm View MSA
121344121 5274 Embryophyte View MSA
123426132 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain